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		<title>Wolverine</title>
		<link>http://reperiendi.wordpress.com/2011/10/31/wolverine/</link>
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		<pubDate>Tue, 01 Nov 2011 05:10:51 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1762</guid>
		<description><![CDATA[I used this Halloween as motivation to start working out a few months ago, because I wanted to be a passable Wolverine; I made a lot of progress, but not so much that I feel comfortable posting pictures of muscles. Fortunately, my mom is a seamstress and made me a great jacket. Here&#8217;s the result:<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1762&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>I used this Halloween as motivation to start working out a few months ago, because I wanted to be a passable Wolverine; I made a lot of progress, but not so much that I feel comfortable posting pictures of muscles.  Fortunately, my mom is a seamstress and made me a great jacket.  Here&#8217;s the result:</p>
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		<title>Making of Wolverine&#8217;s claws</title>
		<link>http://reperiendi.wordpress.com/2011/07/11/making-of-wolverines-claws/</link>
		<comments>http://reperiendi.wordpress.com/2011/07/11/making-of-wolverines-claws/#comments</comments>
		<pubDate>Mon, 11 Jul 2011 23:14:36 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Fun links]]></category>

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		<description><![CDATA[http://www.krisabel.ctv.ca/post/2450347.aspx<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1752&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>http://www.krisabel.ctv.ca/post/2450347.aspx</p>
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		<title>Euphraneid</title>
		<link>http://reperiendi.wordpress.com/2011/06/02/euphraneid/</link>
		<comments>http://reperiendi.wordpress.com/2011/06/02/euphraneid/#comments</comments>
		<pubDate>Thu, 02 Jun 2011 23:35:11 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Borges]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1733</guid>
		<description><![CDATA[The Euphraneid is a collection of Book of Mormon pseudepigrapha. They were ostensibly written by Moroni, the son of Mormon, during and after his work on the Nephite record&#8230;<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1733&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>The <a href="http://www.goodreads.com/review/show/173160698">Euphraneid</a> is a collection of Book of Mormon pseudepigrapha. They were ostensibly written by Moroni, the son of Mormon, during and after his work on the Nephite record&#8230;</p>
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		<title>Semantics for the blue calculus</title>
		<link>http://reperiendi.wordpress.com/2011/04/29/semantics-for-the-blue-calculus/</link>
		<comments>http://reperiendi.wordpress.com/2011/04/29/semantics-for-the-blue-calculus/#comments</comments>
		<pubDate>Fri, 29 Apr 2011 22:38:56 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Math]]></category>
		<category><![CDATA[Category theory]]></category>
		<category><![CDATA[Quantum]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1718</guid>
		<description><![CDATA[Blue calculus MonCat 2Hilb Set (as a one object bicategory) Types monoidal categories manifolds 2 Hilbert spaces * Terms with one free variable monoidal functors manifolds with boundary linear functors sets Rewrite rules monoidal natural transformation manifolds with corners linear natural transformations functions Tensor product juxtaposition (disjoint union) tensor product cartesian product where is free [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1718&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<table cellspacing="15">
<tr>
<td><u>Blue calculus </u></td>
<td><u> MonCat </u></td>
<td><u> <img src='http://s0.wp.com/latex.php?latex=%5Cfrac%7Bn+%5Cmbox%7BCob%7D_2%7D%7B%7D&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;frac{n &#92;mbox{Cob}_2}{}' title='&#92;frac{n &#92;mbox{Cob}_2}{}' class='latex' /> </u></td>
<td><u> 2Hilb </u></td>
<td><u> Set (as a one object bicategory)</u></td>
</tr>
<tr>
<td>Types </td>
<td> monoidal categories </td>
<td> manifolds </td>
<td> 2 Hilbert spaces </td>
<td> * </td>
</tr>
<tr>
<td>Terms with one free variable </td>
<td> monoidal functors </td>
<td> manifolds with boundary </td>
<td> linear functors </td>
<td> sets </td>
</tr>
<tr>
<td>Rewrite rules </td>
<td> monoidal natural transformation </td>
<td> manifolds with corners </td>
<td> linear natural transformations </td>
<td> functions </td>
</tr>
<tr>
<td>Tensor product </td>
<td> <img src='http://s0.wp.com/latex.php?latex=%5Cboxtimes&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;boxtimes' title='&#92;boxtimes' class='latex' /> </td>
<td> juxtaposition (disjoint union) </td>
<td> tensor product </td>
<td> cartesian product </td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%28T+%7C+T%27%29%3AY&amp;bg=fff&amp;fg=222&amp;s=0' alt='(T | T&#039;):Y' title='(T | T&#039;):Y' class='latex' /> where <img src='http://s0.wp.com/latex.php?latex=x%3AX&amp;bg=fff&amp;fg=222&amp;s=0' alt='x:X' title='x:X' class='latex' /> is free </td>
<td> <img src='http://s0.wp.com/latex.php?latex=%28%5B%5BT%5D%5D+%5Cotimes_Y+%5B%5BT%27%5D%5D%29%3AX+%5Cto+Y&amp;bg=fff&amp;fg=222&amp;s=0' alt='([[T]] &#92;otimes_Y [[T&#039;]]):X &#92;to Y' title='([[T]] &#92;otimes_Y [[T&#039;]]):X &#92;to Y' class='latex' /> </td>
<td> formal sum of cobordisms with boundary from <img src='http://s0.wp.com/latex.php?latex=X&amp;bg=fff&amp;fg=222&amp;s=0' alt='X' title='X' class='latex' /> to <img src='http://s0.wp.com/latex.php?latex=Y&amp;bg=fff&amp;fg=222&amp;s=0' alt='Y' title='Y' class='latex' /> </td>
<td> sum of linear functors </td>
<td> disjoint union </td>
</tr>
</table>
<p>In the MonCat column, <img src='http://s0.wp.com/latex.php?latex=%5Cboxtimes&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;boxtimes' title='&#92;boxtimes' class='latex' /> is the categorified version of the tensor product of monoids.</p>
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		<title>Axiom of fun choice</title>
		<link>http://reperiendi.wordpress.com/2011/04/14/axiom-of-fun-choice/</link>
		<comments>http://reperiendi.wordpress.com/2011/04/14/axiom-of-fun-choice/#comments</comments>
		<pubDate>Thu, 14 Apr 2011 16:37:09 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Fun links]]></category>
		<category><![CDATA[Math]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1707</guid>
		<description><![CDATA[A fun choice function is a function defined on a collection of jobs that must be done such that for every job is an element of fun. The axiom of fun choice states, For any set of jobs that must be done, there exists a fun choice function defined on This axiom asserts that one [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1707&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>A <strong>fun choice function</strong> is a function <img src='http://s0.wp.com/latex.php?latex=f&amp;bg=fff&amp;fg=222&amp;s=0' alt='f' title='f' class='latex' /> defined on a collection <img src='http://s0.wp.com/latex.php?latex=J&amp;bg=fff&amp;fg=222&amp;s=0' alt='J' title='J' class='latex' /> of jobs that must be done such that for every job <img src='http://s0.wp.com/latex.php?latex=j+%5Cin+J%2C+f%28j%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='j &#92;in J, f(j)' title='j &#92;in J, f(j)' class='latex' /> is an element of fun.  The <strong>axiom of fun choice</strong> states,</p>
<p align="center"><em>For any set <img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+J&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle J' title='&#92;displaystyle J' class='latex' /> of jobs that must be done, there exists a fun choice function defined on <img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+J.&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle J.' title='&#92;displaystyle J.' class='latex' /></em></p>
<p>This axiom asserts that one can always find the fun in any job that must be done; a theorem of Poppins deduces from this that all such jobs are games.</p>
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		<slash:comments>4</slash:comments>
	
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		<title>Monster manual</title>
		<link>http://reperiendi.wordpress.com/2011/04/13/monster-manual/</link>
		<comments>http://reperiendi.wordpress.com/2011/04/13/monster-manual/#comments</comments>
		<pubDate>Wed, 13 Apr 2011 18:41:33 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1705</guid>
		<description><![CDATA[What magical creature lives deep in the earth&#8217;s crust and has a horrible lisp? A BATHOLITHK.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1705&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>What magical creature lives deep in the earth&#8217;s crust and has a horrible lisp?  A BATHOLITHK.</p>
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		<title>Better than anything 2</title>
		<link>http://reperiendi.wordpress.com/2011/04/01/better-than-anything-2/</link>
		<comments>http://reperiendi.wordpress.com/2011/04/01/better-than-anything-2/#comments</comments>
		<pubDate>Fri, 01 Apr 2011 20:42:43 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1703</guid>
		<description><![CDATA[Better than This Week from Baez, Better than Lou Kauffman&#8217;s knots, Better than all of the string theory Witten&#8217;s forgot, Better than Feynman&#8217;s graffiti, Better than Calabi-Yau, Better than Pauli&#8217;s neutrino, Better than mu and than tau, Better than Curie, Poincaré, And Niels and Albert at Solvay Better than anything except being in love.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1703&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Better than This Week from Baez,<br />
Better than Lou Kauffman&#8217;s knots,<br />
Better than all of the string theory<br />
Witten&#8217;s forgot,</p>
<p>Better than Feynman&#8217;s graffiti,<br />
Better than Calabi-Yau,<br />
Better than Pauli&#8217;s neutrino,<br />
Better than mu and than tau,</p>
<p>Better than Curie, Poincaré,<br />
And Niels and Albert at Solvay<br />
Better than anything except being in love.</p>
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		<title>Better than anything 1</title>
		<link>http://reperiendi.wordpress.com/2011/03/31/better-than-anything-1/</link>
		<comments>http://reperiendi.wordpress.com/2011/03/31/better-than-anything-1/#comments</comments>
		<pubDate>Fri, 01 Apr 2011 00:11:37 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Poetry]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1696</guid>
		<description><![CDATA[Better than memories wholesale, Better than lasers on mars, Better than alien obelisks Chock full of stars, Better than blade runners dreaming, Better than spice that must flow, Better than River and reavers, Better than lightsaber glow, Better than &#8220;Dammit, I&#8217;m a doc!&#8221; Or simply &#8220;fascinating&#8221; Spock, Better than anything except being in love.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1696&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Better than memories wholesale,<br />
Better than lasers on mars,<br />
Better than alien obelisks<br />
Chock full of stars,</p>
<p>Better than blade runners dreaming,<br />
Better than spice that must flow,<br />
Better than River and reavers,<br />
Better than lightsaber glow,</p>
<p>Better than &#8220;Dammit, I&#8217;m a doc!&#8221;<br />
Or simply &#8220;fascinating&#8221; Spock,<br />
Better than anything except being in love.</p>
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		<title>Powers of 10</title>
		<link>http://reperiendi.wordpress.com/2011/03/10/powers-of-10/</link>
		<comments>http://reperiendi.wordpress.com/2011/03/10/powers-of-10/#comments</comments>
		<pubDate>Thu, 10 Mar 2011 22:50:16 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Astronomy]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1685</guid>
		<description><![CDATA[This is an image my brother Doug and I made. A blanket is at the far left; then grass, streets, city, shoreline, clouds, the earth, orbits of the moon, Earth, Mars, Jupiter, Saturn, Neptune, nearby stars, the Milky Way, and distant galaxies. (Click for a much bigger view.) Can you guess how we made it?<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1685&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>This is an image my brother Doug and I made.  A blanket is at the far left; then grass, streets, city, shoreline, clouds, the earth, orbits of the moon, Earth, Mars, Jupiter, Saturn, Neptune, nearby stars, the Milky Way, and distant galaxies. (Click for a much bigger view.)<br />
<a href="http://reperiendi.files.wordpress.com/2011/03/powersof10.png"><img src="http://reperiendi.files.wordpress.com/2011/03/powersof10.png?w=720&#038;h=46" alt="" title="powersof10" width="720" height="46" class="aligncenter size-full wp-image-1686" /></a><br />
Can you guess how we made it?</p>
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			<media:title type="html">powersof10</media:title>
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		<title>More views of the metapixel</title>
		<link>http://reperiendi.wordpress.com/2011/03/10/more-views-of-the-metapixel/</link>
		<comments>http://reperiendi.wordpress.com/2011/03/10/more-views-of-the-metapixel/#comments</comments>
		<pubDate>Thu, 10 Mar 2011 22:32:13 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1680</guid>
		<description><![CDATA[Double spiral: Single spiral the other way: Double spiral the other way:<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1680&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Double spiral:<br />
<a href="http://reperiendi.files.wordpress.com/2011/03/conformal2.png"><img src="http://reperiendi.files.wordpress.com/2011/03/conformal2.png?w=720&#038;h=490" alt="" title="conformal2" width="720" height="490" class="aligncenter size-full wp-image-1681" /></a><br />
Single spiral the other way:<br />
<a href="http://reperiendi.files.wordpress.com/2011/03/conformal-1.png"><img src="http://reperiendi.files.wordpress.com/2011/03/conformal-1.png?w=720&#038;h=490" alt="" title="conformal-1" width="720" height="490" class="aligncenter size-full wp-image-1682" /></a><br />
Double spiral the other way:<br />
<a href="http://reperiendi.files.wordpress.com/2011/03/conformal-2.png"><img src="http://reperiendi.files.wordpress.com/2011/03/conformal-2.png?w=720&#038;h=490" alt="" title="conformal-2" width="720" height="490" class="aligncenter size-full wp-image-1683" /></a></p>
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		<title>Escher &#8220;Print gallery&#8221; metapixel</title>
		<link>http://reperiendi.wordpress.com/2011/03/10/print-gallery-metapixel/</link>
		<comments>http://reperiendi.wordpress.com/2011/03/10/print-gallery-metapixel/#comments</comments>
		<pubDate>Thu, 10 Mar 2011 07:23:55 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Math]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1671</guid>
		<description><![CDATA[This one uses a conformal transformation like Escher did in his &#8220;Print Gallery&#8220;: A picture that contains a scaled-down copy of itself is periodic both in theta and in log (r). Taking the complex log of such an image gives a rectangular tiling of the plane; by scaling and rotating, I got a new tiling, [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1671&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>This one uses a conformal transformation like Escher did in his &#8220;<a href="http://escherdroste.math.leidenuniv.nl/">Print Gallery</a>&#8220;:<br />
<a href="http://reperiendi.files.wordpress.com/2011/03/conformal.png"><img src="http://reperiendi.files.wordpress.com/2011/03/conformal.png?w=720&#038;h=490" alt="" title="conformal" width="720" height="490" class="aligncenter size-full wp-image-1672" /></a><br />
A picture that contains a scaled-down copy of itself is periodic both in theta <i>and</i> in log (r).  Taking the complex log of such an image gives a rectangular tiling of the plane; by scaling and rotating, I got a new tiling, then exponentiated it.  Now going around 2 pi radians takes you diagonally across the original rectangle, so you end up one level away from where you started.</p>
<p>[Edit] See also <a href="http://reperiendi.wordpress.com/2011/03/10/more-views-of-the-metapixel/">these better versions</a>.</p>
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			<media:title type="html">conformal</media:title>
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		<title>Droste OTCA metapixel</title>
		<link>http://reperiendi.wordpress.com/2011/03/08/droste-otca-metapixel/</link>
		<comments>http://reperiendi.wordpress.com/2011/03/08/droste-otca-metapixel/#comments</comments>
		<pubDate>Tue, 08 Mar 2011 22:09:39 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Math]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1664</guid>
		<description><![CDATA[John Conway and some of his friends invented a cellular automaton called &#8220;Life&#8221;. It&#8217;s Turing complete, so you can make a Life pattern that runs Life. The OTCA metapixel has all its logic around the edges of a vast field that gets filled with light-weight spaceships when the cell is on. (See here, here, and [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1664&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>John Conway and some of his friends invented a cellular automaton called &#8220;Life&#8221;.  It&#8217;s Turing complete, so you can make a Life pattern that runs Life.  The OTCA metapixel has all its logic around the edges of a vast field that gets filled with light-weight spaceships when the cell is on.  (See <a href="http://www.conwaylife.com/wiki/index.php?title=OTCA_metapixel">here</a>, <a href="http://b3s23life.blogspot.com/2006_09_01_archive.html">here</a>, and <a href="http://otcametapixel.blogspot.com/">here</a> for more details.) </p>
<p>This image uses a logarithmic spiral to zoom through a factor of 2048 after one turn.  There&#8217;s a little bit of misalignment between the largest scale and the smallest one, but I think it still turned out pretty well (click for a larger view):<br />
<a href="http://reperiendi.files.wordpress.com/2011/03/droste.png"><img src="http://reperiendi.files.wordpress.com/2011/03/droste.png?w=720&#038;h=490" alt="" title="OTCA metapixel" width="720" height="490" class="aligncenter size-full wp-image-1665" /></a></p>
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			<media:title type="html">reperiendi</media:title>
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		<media:content url="http://reperiendi.files.wordpress.com/2011/03/droste.png" medium="image">
			<media:title type="html">OTCA metapixel</media:title>
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		<item>
		<title>Hooped-up 24-cell</title>
		<link>http://reperiendi.wordpress.com/2011/03/01/hooped-up-24-cell/</link>
		<comments>http://reperiendi.wordpress.com/2011/03/01/hooped-up-24-cell/#comments</comments>
		<pubDate>Tue, 01 Mar 2011 18:12:57 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1653</guid>
		<description><![CDATA[The 24-cell is really cool. It&#8217;s the only self-dual regular polytope that&#8217;s not a simplex or a polygon. Its vertices form the multiplicative group of units in the Hurwitz quaternion ring. It tiles Euclidean 4-space. Spheres inscribed in the octahedra give the closest packing of spheres in 4 dimensions. And, well, there are 24 of [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1653&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>The <a href="http://en.wikipedia.org/wiki/24-cell">24-cell is really cool</a>.  It&#8217;s the only self-dual regular polytope that&#8217;s not a simplex or a polygon.  Its vertices form the multiplicative group of units in the Hurwitz quaternion ring.  It tiles Euclidean 4-space.  Spheres inscribed in the octahedra give the closest packing of spheres in 4 dimensions.  And, well, there are <a href="http://math.ucr.edu/home/baez/numbers/#24">24 of them</a>.<br />
<a href="http://reperiendi.files.wordpress.com/2011/03/img_20110228_1926161.jpg"><img src="http://reperiendi.files.wordpress.com/2011/03/img_20110228_1926161.jpg?w=720&#038;h=540" alt="" title="Icositetrachoron" width="720" height="540" class="aligncenter size-full wp-image-1656" /></a><br />
<a href="http://reperiendi.files.wordpress.com/2011/03/img_20110228_192631.jpg"><img src="http://reperiendi.files.wordpress.com/2011/03/img_20110228_192631.jpg?w=720&#038;h=540" alt="" title="24-cell closeup" width="720" height="540" class="aligncenter size-full wp-image-1657" /></a><br />
We ran out of tape while making the inner cuboctahedron&#8211;one of the triangular sides is missing.  But we came darn close!  Compare:<br />
<img alt="" src="http://upload.wikimedia.org/wikipedia/commons/thumb/3/3d/Stereographic_polytope_24cell_faces.png/600px-Stereographic_polytope_24cell_faces.png" title="Computer-generated stereographic projection of the icositetrachoron" class="alignnone" width="600" height="600" /></p>
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			<media:title type="html">reperiendi</media:title>
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			<media:title type="html">Icositetrachoron</media:title>
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		<media:content url="http://reperiendi.files.wordpress.com/2011/03/img_20110228_192631.jpg" medium="image">
			<media:title type="html">24-cell closeup</media:title>
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		<media:content url="http://upload.wikimedia.org/wikipedia/commons/thumb/3/3d/Stereographic_polytope_24cell_faces.png/600px-Stereographic_polytope_24cell_faces.png" medium="image">
			<media:title type="html">Computer-generated stereographic projection of the icositetrachoron</media:title>
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		<title>Astounding protein folding paper</title>
		<link>http://reperiendi.wordpress.com/2011/02/22/astounding-protein-folding-paper/</link>
		<comments>http://reperiendi.wordpress.com/2011/02/22/astounding-protein-folding-paper/#comments</comments>
		<pubDate>Tue, 22 Feb 2011 19:15:00 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[General physics]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1650</guid>
		<description><![CDATA[By assuming that to get from point A to point B you don&#8217;t have to hit a sequence of points in between&#8212;i.e. the way quantum particles work&#8212;these guys accurately predict protein folding rates in 15 different real proteins. This is huge.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1650&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>By assuming that to get from point A to point B you don&#8217;t have to hit a sequence of points in between&#8212;i.e. the way quantum particles work&#8212;<a href="http://arxiv.org/abs/1102.3748">these guys</a> accurately predict protein folding rates in 15 different real proteins.  This is huge.</p>
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		<title>The Best is Lost</title>
		<link>http://reperiendi.wordpress.com/2011/02/19/the-best-is-lost/</link>
		<comments>http://reperiendi.wordpress.com/2011/02/19/the-best-is-lost/#comments</comments>
		<pubDate>Sat, 19 Feb 2011 21:28:56 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Poetry]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1647</guid>
		<description><![CDATA[I am not resigned to the shutting away of loving hearts in the hard ground So it is, and so it will be, for so it has been, time out of mind: Into the darkness they go, the wise and the lovely. Crowned With lilies and laurel they go: but I am not resigned. Lovers [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1647&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>I am not resigned to the shutting away of loving hearts in the hard ground<br />
So it is, and so it will be, for so it has been, time out of mind:<br />
Into the darkness they go, the wise and the lovely. Crowned<br />
With lilies and laurel they go: but I am not resigned.</p>
<p>Lovers and thinkers, into the earth with you.<br />
Be one with the dull, the indiscriminate dust.<br />
A fragment of what you felt, of what you knew,<br />
A formula, a phrase remains &#8211; but the best is lost.</p>
<p>The answers quick and keen, the honest look, the laughter, the love -<br />
They are gone. They have gone to feed the roses. Elegant and curled<br />
Is the blossom. Fragrant is the blossom. I know. But I do not approve.<br />
More precious was the light in your eyes than all the roses in the world.</p>
<p>Down, down, down into the darkness of the grave<br />
Gently they go, the beautiful, the tender, the kind:<br />
Quietly they go, the intelligent, the witty, the brave.<br />
I know. But I do not approve. And I am not resigned.</p>
<p>- Edna St Vincent Millay</p>
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		<title>Yudkowski interview</title>
		<link>http://reperiendi.wordpress.com/2011/02/16/yudkowski-interview/</link>
		<comments>http://reperiendi.wordpress.com/2011/02/16/yudkowski-interview/#comments</comments>
		<pubDate>Wed, 16 Feb 2011 19:17:52 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1644</guid>
		<description><![CDATA[Cool interview with Eliezer Yudkowski on Conversations from the Pale Blue Dot.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1644&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><a href="http://commonsenseatheism.com/?p=12147">Cool interview</a> with <a href="http://www.lesswrong.com">Eliezer Yudkowski</a> on <a href="http://commonsenseatheism.com/?p=1911">Conversations from the Pale Blue Dot</a>. </p>
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		<slash:comments>1</slash:comments>
	
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			<media:title type="html">reperiendi</media:title>
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		<title>In case it wasn&#8217;t already abundantly clear&#8230;</title>
		<link>http://reperiendi.wordpress.com/2011/02/15/in-case-it-wasnt-already-abundantly-clear/</link>
		<comments>http://reperiendi.wordpress.com/2011/02/15/in-case-it-wasnt-already-abundantly-clear/#comments</comments>
		<pubDate>Tue, 15 Feb 2011 23:56:12 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Math]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1641</guid>
		<description><![CDATA[You know a guy&#8217;s a nerd if he pulls over to take a picture of his odometer because it&#8217;s showing the Fibonacci sequence. But it takes a special kind of nerd to have reset his trip odometer 132.1 miles ahead of time in anticipation of taking the picture.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1641&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>You know a guy&#8217;s a nerd if he pulls over to take a picture of his odometer because it&#8217;s showing the Fibonacci sequence.<br />
<a href="http://reperiendi.files.wordpress.com/2011/02/fibo.jpg"><img src="http://reperiendi.files.wordpress.com/2011/02/fibo.jpg?w=720" alt="" title="fibodometer"   class="aligncenter size-full wp-image-1642" /></a><br />
But it takes a special kind of nerd to have reset his trip odometer 132.1 miles ahead of time in anticipation of taking the picture.</p>
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		<slash:comments>3</slash:comments>
	
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			<media:title type="html">reperiendi</media:title>
		</media:content>

		<media:content url="http://reperiendi.files.wordpress.com/2011/02/fibo.jpg" medium="image">
			<media:title type="html">fibodometer</media:title>
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		<item>
		<title>Queensland flooding</title>
		<link>http://reperiendi.wordpress.com/2011/02/09/queensland-flooding/</link>
		<comments>http://reperiendi.wordpress.com/2011/02/09/queensland-flooding/#comments</comments>
		<pubDate>Thu, 10 Feb 2011 00:58:07 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1632</guid>
		<description><![CDATA[<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1632&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<span style="text-align:center; display: block;"><a href="http://reperiendi.wordpress.com/2011/02/09/queensland-flooding/"><img src="http://img.youtube.com/vi/kYUpkPTcqPY/2.jpg" alt="" /></a></span>
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		<title>Polarization for breakfast</title>
		<link>http://reperiendi.wordpress.com/2011/02/05/polarization-for-breakfast/</link>
		<comments>http://reperiendi.wordpress.com/2011/02/05/polarization-for-breakfast/#comments</comments>
		<pubDate>Sun, 06 Feb 2011 01:29:58 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1630</guid>
		<description><![CDATA[<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1630&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<span style="text-align:center; display: block;"><a href="http://reperiendi.wordpress.com/2011/02/05/polarization-for-breakfast/"><img src="http://img.youtube.com/vi/7c9kknuqgbY/2.jpg" alt="" /></a></span>
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		<title>Legos this morning</title>
		<link>http://reperiendi.wordpress.com/2011/02/05/legos-this-morning/</link>
		<comments>http://reperiendi.wordpress.com/2011/02/05/legos-this-morning/#comments</comments>
		<pubDate>Sun, 06 Feb 2011 01:29:08 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1618</guid>
		<description><![CDATA[This one ended up looking rather shark-like: William chose&#8211;who else?&#8211;Yoda to pilot the green ship.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1618&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>This one ended up looking rather shark-like:<br />
<a href="http://reperiendi.files.wordpress.com/2011/02/img_20110205_164937-e1296955164147.jpg"><img src="http://reperiendi.files.wordpress.com/2011/02/img_20110205_164937-e1296955164147.jpg?w=720&#038;h=540" alt="" title="Blue ship" width="720" height="540" class="aligncenter size-full wp-image-1619" /></a><a href="http://reperiendi.files.wordpress.com/2011/02/img_20110205_164959-e1296955400186.jpg"><img src="http://reperiendi.files.wordpress.com/2011/02/img_20110205_164959-e1296955400186.jpg?w=720&#038;h=960" alt="" title="Blue ship" width="720" height="960" class="aligncenter size-full wp-image-1620" /></a><br />
William chose&#8211;who else?&#8211;Yoda to pilot the green ship.<br />
<a href="http://reperiendi.files.wordpress.com/2011/02/img_20110205_165058-e1296955416818.jpg"><img src="http://reperiendi.files.wordpress.com/2011/02/img_20110205_165058-e1296955416818.jpg?w=720&#038;h=540" alt="" title="Green ship" width="720" height="540" class="aligncenter size-full wp-image-1621" /></a></p>
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		<slash:comments>0</slash:comments>
	
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			<media:title type="html">reperiendi</media:title>
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		<media:content url="http://reperiendi.files.wordpress.com/2011/02/img_20110205_164937-e1296955164147.jpg" medium="image">
			<media:title type="html">Blue ship</media:title>
		</media:content>

		<media:content url="http://reperiendi.files.wordpress.com/2011/02/img_20110205_164959-e1296955400186.jpg" medium="image">
			<media:title type="html">Blue ship</media:title>
		</media:content>

		<media:content url="http://reperiendi.files.wordpress.com/2011/02/img_20110205_165058-e1296955416818.jpg" medium="image">
			<media:title type="html">Green ship</media:title>
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		<title>Bioluminescence</title>
		<link>http://reperiendi.wordpress.com/2011/01/31/bioluminescence/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/31/bioluminescence/#comments</comments>
		<pubDate>Mon, 31 Jan 2011 21:57:33 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Evolution]]></category>
		<category><![CDATA[Fun links]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1614</guid>
		<description><![CDATA[Australia&#8217;s massive forest fires in 2006 were followed by 10cm of rain, which washed all the nutrient-rich ash into the lakes, which caused a bioluminescent algae bloom in 2008.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1614&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Australia&#8217;s massive forest fires in 2006 were followed by 10cm of rain, which washed all the nutrient-rich ash into the lakes, which caused a <a href="http://io9.com/5747457/why-australian-mountain-wildfires-in-2006-caused-these-lakes-to-glow-in-2008/gallery/">bioluminescent algae bloom</a> in 2008.<br />
<a href="http://reperiendi.files.wordpress.com/2011/01/bioluminescencethu_423.jpg"><img src="http://reperiendi.files.wordpress.com/2011/01/bioluminescencethu_423.jpg?w=720&#038;h=479" alt="" title="bioluminescencethu_423" width="720" height="479" class="aligncenter size-full wp-image-1615" /></a></p>
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		<slash:comments>0</slash:comments>
	
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		<media:content url="http://reperiendi.files.wordpress.com/2011/01/bioluminescencethu_423.jpg" medium="image">
			<media:title type="html">bioluminescencethu_423</media:title>
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		<item>
		<title>Regular tilings of three-dimensional spaces</title>
		<link>http://reperiendi.wordpress.com/2011/01/31/regular-tilings-of-three-dimensional-spaces/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/31/regular-tilings-of-three-dimensional-spaces/#comments</comments>
		<pubDate>Mon, 31 Jan 2011 21:41:50 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Astronomy]]></category>
		<category><![CDATA[Fun links]]></category>
		<category><![CDATA[General physics]]></category>
		<category><![CDATA[Math]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1606</guid>
		<description><![CDATA[If you start at the north pole and make an equilateral triangle 6000 miles on a side, the bottom will lie on the equator, each of the angles will be 90 degrees, and only four of them will fit around the pole. In a similar way, large enough tetrahedra would tile the surface of a [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1606&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>If you start at the north pole and make an equilateral triangle 6000 miles on a side, the bottom will lie on the equator, each of the angles will be 90 degrees, and only four of them will fit around the pole.<br />
<a href="http://reperiendi.files.wordpress.com/2011/01/uniform_tiling_332-t1.png"><img src="http://reperiendi.files.wordpress.com/2011/01/uniform_tiling_332-t1.png?w=720&#038;h=713" alt="" title="Uniform_tiling_332-t1" width="720" height="713" class="aligncenter size-full wp-image-1610" /></a><br />
In a similar way, large enough tetrahedra would tile the surface of a hypersphere.  <a href="http://www-sop.inria.fr/geometrica/collaborations/OrbiCG/thesis_Senden.pdf">This paper</a> identifies the eleven regular tilings of three-dimensional spaces and whether they&#8217;re spherical, Euclidean, or hyperbolic tilings, and then looks at the geometry of spacetime to see how it might be tiled.</p>
<p>The &#8220;cubic&#8221; tilings (where eight polyhedra meet around a vertex like cubes do in Euclidean space) are amenable to taking cross-sections; this tiling of hyperbolic space with dodecahedra<br />
<a href="http://reperiendi.files.wordpress.com/2011/01/dodecahedral.jpg"><img src="http://reperiendi.files.wordpress.com/2011/01/dodecahedral.jpg?w=720" alt="" title="dodecahedral"   class="aligncenter size-full wp-image-1607" /></a><br />
has a cross section with a tiling of the hyperbolic plane with pentagons:<br />
<a href="http://reperiendi.files.wordpress.com/2011/01/screen-shot-2011-01-31-at-1-35-53-pm.png"><img src="http://reperiendi.files.wordpress.com/2011/01/screen-shot-2011-01-31-at-1-35-53-pm.png?w=720&#038;h=720" alt="" title="Screen shot 2011-01-31 at 1.35.53 PM" width="720" height="720" class="aligncenter size-full wp-image-1608" /></a></p>
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		<media:content url="http://reperiendi.files.wordpress.com/2011/01/uniform_tiling_332-t1.png" medium="image">
			<media:title type="html">Uniform_tiling_332-t1</media:title>
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		<media:content url="http://reperiendi.files.wordpress.com/2011/01/dodecahedral.jpg" medium="image">
			<media:title type="html">dodecahedral</media:title>
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			<media:title type="html">Screen shot 2011-01-31 at 1.35.53 PM</media:title>
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		<title>Willie&#8217;s fugue</title>
		<link>http://reperiendi.wordpress.com/2011/01/23/willies-fugue/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/23/willies-fugue/#comments</comments>
		<pubDate>Mon, 24 Jan 2011 03:40:41 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1602</guid>
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			<content:encoded><![CDATA[<span style="text-align:center; display: block;"><a href="http://reperiendi.wordpress.com/2011/01/23/willies-fugue/"><img src="http://img.youtube.com/vi/jJdWVCYBgAI/2.jpg" alt="" /></a></span>
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		<title>Toccata in D minor</title>
		<link>http://reperiendi.wordpress.com/2011/01/22/toccata-in-d-minor/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/22/toccata-in-d-minor/#comments</comments>
		<pubDate>Sun, 23 Jan 2011 02:05:19 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1598</guid>
		<description><![CDATA[This is what about ten minutes every other day or so for a year gets you.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1598&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>This is what about ten minutes every other day or so for a year gets you.<br />
<span style="text-align:center; display: block;"><a href="http://reperiendi.wordpress.com/2011/01/22/toccata-in-d-minor/"><img src="http://img.youtube.com/vi/x8Iqvjdjz-E/2.jpg" alt="" /></a></span></p>
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		<title>Apollo</title>
		<link>http://reperiendi.wordpress.com/2011/01/18/apollo/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/18/apollo/#comments</comments>
		<pubDate>Tue, 18 Jan 2011 16:58:10 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1593</guid>
		<description><![CDATA[Apollo. adj 1. brave, without fear (from L. ab- not + pollo chicken).<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1593&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><b>Apollo.</b> <i>adj</i> <b>1.</b> brave, without fear (from <i>L. ab-</i> not + <i>pollo</i> chicken).</p>
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		<title>Silicon carbide</title>
		<link>http://reperiendi.wordpress.com/2011/01/17/silicon-carbide/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/17/silicon-carbide/#comments</comments>
		<pubDate>Tue, 18 Jan 2011 01:32:28 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1589</guid>
		<description><![CDATA[I took this photo of my chunk of silicon carbide. With some time I could probably find a crystal pure enough to emit light.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1589&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>I took this photo of my chunk of silicon carbide.<br />
<a href="http://reperiendi.files.wordpress.com/2011/01/img_1858.jpg"><img src="http://reperiendi.files.wordpress.com/2011/01/img_1858.jpg?w=720&#038;h=480" alt="" title="Silicon carbide" width="720" height="480" class="aligncenter size-full wp-image-1590" /></a><br />
With some time I could probably find a crystal pure enough to emit light.</p>
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			<media:title type="html">Silicon carbide</media:title>
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		<title>Doodling like Vi</title>
		<link>http://reperiendi.wordpress.com/2011/01/15/doodling-like-vi/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/15/doodling-like-vi/#comments</comments>
		<pubDate>Sun, 16 Jan 2011 00:00:47 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1587</guid>
		<description><![CDATA[Transcript: Say you&#8217;re me and you just watched Vi Hart&#8217;s video on infinity elephants and you totally missed the joke about Mr. Tusks even though you read Dinosaur Comics all the time but you liked the bit about Apollonian gaskets, which don&#8217;t blow out in Battle Mountain like the one in your car did but [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1587&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><span style="text-align:center; display: block;"><a href="http://reperiendi.wordpress.com/2011/01/15/doodling-like-vi/"><img src="http://img.youtube.com/vi/RTVeMWJ8lbI/2.jpg" alt="" /></a></span><br />
Transcript:</p>
<p>Say you&#8217;re me and you just watched Vi Hart&#8217;s video on infinity elephants and you totally missed the joke about Mr. Tusks even though you read Dinosaur Comics all the time but you liked the bit about Apollonian gaskets, which don&#8217;t blow out in Battle Mountain like the one in your car did but rather on the way to the L1 point and then you need Richard Feynman to tell you why.  You thought she was going to draw the tiniest camels going through the eye of a needle, but you suppose that would ruin the hyperbole in the parable, so the ellipsis was justified.  Anyway, you decide to avoid circular reasoning and doodle rectangles instead, filling them up with squares.</p>
<p>Eventually you wonder which ones you can fill up with finitely many squares and which ones you need infinitely many for, and so you start with squares and build up some rectangles.  One square can only make one rectangle, itself.  Two squares can only make one rectangle, but it can be lying down or standing up so you decide to say they&#8217;re different.  Three squares make four rectangles and four squares make eight rectangles, and then you start thinking about Vi Hart&#8217;s video on binary trees.  So you put the numbers into a tree, but it looks kind of stern, so you add some fareys to cheer it up.  Then you see that the height of a rectangle is just the sum of its neighbors&#8217; heights, and similarly for the width.  You see lots of nice patterns in the dimensions involving flipping things over or running them backwards, kind of like the Blues Brothers&#8217; police car when it was being chased by the Neo Nazis or that V6 racecar that Johann sent to Frederick.</p>
<p>Now instead of breadth, you decide to go for depth.  Making the rectangles very long or very tall is too boring, so you add one square each time, alternately making it longer and taller.  1 1 2 3 5 8 13 21&#8230;  You get the Fibonacci numbers; the limiting ratio is the golden ratio, [1+sqrt(5)]/2 to 1.  This rectangle is the worst at being approximated by repeated squares so it shows up in systems where repetition is bad, like the angle at which plant leaves grow so they overlap the least and gather the most sunlight or how sunflowers pack the most seeds into a flowerhead and Roger Penrose thinks the Fibonacci spirals in the microtubules in the neurons in your brain are doing quantum error correction.</p>
<p>You decide to look at other irrational numbers to see if they have any nice patterns.  e does.  pi doesn&#8217;t.  square roots of positive integers give repeating palindromes!  You wonder whether all palindromes occur and if not which of the lyrics to Weird Al&#8217;s song Bob are special that way.  And maybe then you make up a palindrome with vi hart&#8217;s name in it and turn it into a square root.</p>
<p>sqrt(1770203383334463140868642687939525148769043583402360581400094929361780283347187467842099172837131164923233584044530)</p>
<p>Maybe you decide that you want to doodle some circles after all, so you start with this gasket and figure out where the circles touch the line.  The numbers look very familiar.  You wonder what the areas of the circles are and how the gasket relates to the modular group and Poincare&#8217;s half-plane model of the hyperbolic plane and wish you had time to just sit in math class and doodle&#8230;</p>
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		<title>Buckyball Bacteriophage</title>
		<link>http://reperiendi.wordpress.com/2011/01/11/buckyball-bacteriophage/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/11/buckyball-bacteriophage/#comments</comments>
		<pubDate>Tue, 11 Jan 2011 22:02:24 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Design]]></category>
		<category><![CDATA[Evolution]]></category>
		<category><![CDATA[Math]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1574</guid>
		<description><![CDATA[The t4 bacteriophage infects e. coli.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1574&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><a href="http://reperiendi.files.wordpress.com/2011/01/photo-on-2011-01-12-at-11-57-2.jpg"><img src="http://reperiendi.files.wordpress.com/2011/01/photo-on-2011-01-12-at-11-57-2.jpg?w=720" alt="" title="t4 bacteriophage"   class="aligncenter size-full wp-image-1581" /></a>The t4 bacteriophage infects <i>e. coli</i>.</p>
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			<media:title type="html">t4 bacteriophage</media:title>
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		<title>Dodecahedral Buckyballs</title>
		<link>http://reperiendi.wordpress.com/2011/01/06/dodecahedral-buckyballs/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/06/dodecahedral-buckyballs/#comments</comments>
		<pubDate>Thu, 06 Jan 2011 19:26:21 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Design]]></category>
		<category><![CDATA[Math]]></category>

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		<title>Hyperbolic Buckyballs</title>
		<link>http://reperiendi.wordpress.com/2011/01/06/hyperbolic-buckyballs/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/06/hyperbolic-buckyballs/#comments</comments>
		<pubDate>Thu, 06 Jan 2011 19:24:05 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Design]]></category>
		<category><![CDATA[Math]]></category>

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		<title>Icosahedral Buckyballs</title>
		<link>http://reperiendi.wordpress.com/2011/01/06/buckyballs/</link>
		<comments>http://reperiendi.wordpress.com/2011/01/06/buckyballs/#comments</comments>
		<pubDate>Thu, 06 Jan 2011 19:20:48 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Design]]></category>
		<category><![CDATA[Math]]></category>

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		<title>Math doodles</title>
		<link>http://reperiendi.wordpress.com/2010/12/30/math-doodles/</link>
		<comments>http://reperiendi.wordpress.com/2010/12/30/math-doodles/#comments</comments>
		<pubDate>Thu, 30 Dec 2010 08:11:45 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1563</guid>
		<description><![CDATA[Vi Hart&#8216;s got some great stuff.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1563&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><a href="http://vihart.com">Vi Hart</a>&#8216;s got some great stuff.<br />
<span style="text-align:center; display: block;"><a href="http://reperiendi.wordpress.com/2010/12/30/math-doodles/"><img src="http://img.youtube.com/vi/heKK95DAKms/2.jpg" alt="" /></a></span></p>
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		<title>The Word of God</title>
		<link>http://reperiendi.wordpress.com/2010/11/03/1556/</link>
		<comments>http://reperiendi.wordpress.com/2010/11/03/1556/#comments</comments>
		<pubDate>Wed, 03 Nov 2010 22:45:08 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Astronomy]]></category>
		<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[Evolution]]></category>
		<category><![CDATA[General physics]]></category>
		<category><![CDATA[History]]></category>
		<category><![CDATA[Poetry]]></category>
		<category><![CDATA[Theocosmology]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1556</guid>
		<description><![CDATA[From desert cliff and mountaintop we trace the wide design, Strike-slip fault and overthrust and syn and anticline&#8230; We gaze upon creation where erosion makes it known, And count the countless aeons in the banding of the stone. Odd, long-vanished creatures and their tracks &#38; shells are found; Where truth has left its sketches on [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1556&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>From desert cliff and mountaintop we trace the wide design,<br />
Strike-slip fault and overthrust and syn and anticline&#8230;<br />
We gaze upon creation where erosion makes it known,<br />
And count the countless aeons in the banding of the stone.<br />
Odd, long-vanished creatures and their tracks &amp; shells are found;<br />
Where truth has left its sketches on the slate below the ground.<br />
The patient stone can speak, if we but listen when it talks.<br />
Humans wrote the Bible; God wrote the rocks.</p>
<p>There are those who name the stars, who watch the sky by night,<br />
Seeking out the darkest place, to better see the light.<br />
Long ago, when torture broke the remnant of his will,<br />
Galileo recanted, but the Earth is moving still.<br />
High above the mountaintops, where only distance bars,<br />
The truth has left its footprints in the dust between the stars.<br />
We may watch and study or may shudder and deny,<br />
Humans wrote the Bible; God wrote the sky.</p>
<p>By stem and root and branch we trace, by feather, fang and fur,<br />
How the living things that are descend from things that were.<br />
The moss, the kelp, the zebrafish, the very mice and flies,<br />
These tiny, humble, wordless things&#8211;how shall they tell us lies?<br />
We are kin to beasts; no other answer can we bring.<br />
The truth has left its fingerprints on every living thing.<br />
Remember, should you have to choose between them in the strife,<br />
Humans wrote the Bible; God wrote life.</p>
<p>And we who listen to the stars, or walk the dusty grade,<br />
Or break the very atoms down to see how they are made,<br />
Or study cells, or living things, seek truth with open hand.<br />
The profoundest act of worship is to try to understand.<br />
Deep in flower and in flesh, in star and soil and seed,<br />
The truth has left its living word for anyone to read.<br />
So turn and look where best you think the story is unfurled.<br />
Humans wrote the Bible; God wrote the world.</p>
<p>-Catherine Faber, <a href="http://www.prometheus-music.com/audio/wordgod.mp3">The Word of God</a></p>
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<enclosure url="http://www.prometheus-music.com/audio/wordgod.mp3" length="4497869" type="audio/mpeg" />
	
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		<title>The Sum of Forking Paths</title>
		<link>http://reperiendi.wordpress.com/2010/09/07/the-sum-of-forking-paths/</link>
		<comments>http://reperiendi.wordpress.com/2010/09/07/the-sum-of-forking-paths/#comments</comments>
		<pubDate>Wed, 08 Sep 2010 04:46:41 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Borges]]></category>
		<category><![CDATA[Perception]]></category>
		<category><![CDATA[Quantum]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1505</guid>
		<description><![CDATA[Paracelsus threw the rose into the fire; it bent on impact, recoiled, and fell deeper among the logs. In the gold-orange light, the stem was already black. The husk began to shrivel and split as the sap boiled away on its surface. The petals blistered and blackened and fell. The five-fingered star beneath them danced [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1505&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Paracelsus threw the rose into the fire; it bent on impact, recoiled, and fell deeper among the logs.  In the gold-orange light, the stem was already black.  The husk began to shrivel and split as the sap boiled away on its surface.  The petals blistered and blackened and fell.  The five-fingered star beneath them danced subtly, swaying in the brittle heat.  For nearly an hour it lay visibly unchanged save for a gradual loss of hue and a universal greyness, then fell into three large pieces as the log crumbled around it.  The ashes glowed orange, then gradually dimmed; the last visible flash of light burst outward from the remains of the stem.  Like all light, it carried within it a timepiece.</p>
<p>Once, when the clock read noon, it traveled without hesitation in a straight path to my retina.  Once it took another course, only to bend around a molecule of nitrogen and reach the same destination.</p>
<p>Once it traced the signature of a man no one remembers.</p>
<p>Once, at half past three, it decayed into a tiny spark and its abominable opposite image; their mutual horrified fascination drew them together, each a moth in the other&#8217;s flame.  The last visible flash of light from their fiery consummation was indistinguishable from the one that spawned them.</p>
<p>Once, when the clock ticked in the silence just before dawn, the light decayed into two mirrored worlds, somewhat better than ours due to the fact that I was never born there.  Both worlds were consumed by mirrored dragons before collapsing back into the chaos from which they arose; all that remained was an orange flash of light.  </p>
<p>Once it traveled to a far distant galaxy, reflected off the waters of a billion worlds and witnessed the death of a thousand stars before returning to the small room in which we sat.</p>
<p>Once it transcribed a short story of Borges in his own cramped scrawl, the six versions he discarded, the corrupt Russian translation by Nabokov, and a version in which the second-to-last word was illegible.</p>
<p>Once it traveled every path, each in its time; once it became and destroyed every possible world.  All these summed to form what was: I saw an orange flash, and in that moment, I was enlightened.</p>
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		<title>Formal axiomatic divination</title>
		<link>http://reperiendi.wordpress.com/2010/09/01/formal-axiomatic-divination/</link>
		<comments>http://reperiendi.wordpress.com/2010/09/01/formal-axiomatic-divination/#comments</comments>
		<pubDate>Thu, 02 Sep 2010 06:40:16 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Borges]]></category>
		<category><![CDATA[Math]]></category>
		<category><![CDATA[Programming]]></category>
		<category><![CDATA[Time]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1496</guid>
		<description><![CDATA[It&#8217;s well known that &#8220;in Xanadu did Kublai Khan a stately pleasure dome decree,&#8221; but his true legacy is the field of formal axiomatic divination. In 1279, Khan sought an auspicious date on which to begin construction of the palace. He consulted each of his twelve astrologers separately and without warning; unsurprisingly, he received twelve [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1496&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>It&#8217;s well known that &#8220;in Xanadu did Kublai Khan a stately pleasure dome decree,&#8221; but his true legacy is the field of formal axiomatic divination.  In 1279, Khan sought an auspicious date on which to begin construction of the palace.  He consulted each of his twelve astrologers separately and without warning; unsurprisingly, he received twelve different answers.  Khan flew into a rage and said that until the astrologer&#8217;s craft was as precise as that of his masons and carpenters, they were banished from his presence.</p>
<p>Kublai Khan died in 1294 and his successor Temur Khan was convinced to reinstate the astrologers.  Despite this, the young mathematician Zhu Shijie took up the old Khan&#8217;s challenge in 1305.  Zhu had already completed two enormously influential mathematical texts: <em>Introduction to Mathematical Studies</em>,  published in 1299, and <em>True reflections of the four unknowns</em>, published in 1303.  This latter work included a table of &#8220;the ancient method of powers&#8221;, now known as Pascal&#8217;s triangle, and Zhu used it extensively in his analysis of polynomials in up to four unknowns.</p>
<p>In turning to the analysis of divination, Zhu naturally focused his attention on the <i>I Ching</i>.  The first step in performing an <i>I Ching</i> divination is casting coins or yarrow stalks to construct a series of hexagrams.  In 1308, Zhu published his treatise on probability theory, <em>Path of the falling stone</em>.  It included an analysis of the probability for generating each hexagram as well as betting strategies for several popular games of chance.  Using his techniques, Zhu became quite wealthy and began to travel; it was during this period that he was exposed to the work of the mathematicians in northern China.  In the preface to <em>True reflections</em>, Mo Ruo writes that &#8220;Zhu Shijie of Yan-shan became famous as a mathematician. He travelled widely for more than twenty years and the number of those who came to be taught by him increased each day.&#8221;</p>
<p>Zhu worked for nearly a decade on the subsequent problem, that of interpreting a series of hexagrams.  Hexagrams themselves are generated one bit at a time by looking at remainders modulo four of random handfuls of yarrow stalks; the four outcomes either specify the next bit directly or in terms of the previous bit.  These latter rules give <i>I Ching</i> its subtitle, <em>The Book of Changes</em>.  For mystical reasons, Zhu asserted that the proper interpretation of a series of hexagrams should also be given by a set of changes, but for years he could find no reason to prefer one set of changes to any other.  However, in 1316, Zhu wrote to Yang Hui:</p>
<p>&#8220;I dreamed that I was summoned to the royal palace.  As I stepped upon the threshold, the sun burst forth over the gilded tile; I was blinded and, overcome, I fell to my knees.  I lifted my hand to shield my eyes from its brilliance, and the Emperor himself took it and raised me up.  To my surprise, he changed his form as I watched; he became so much like me that I thought I was looking in a mirror.</p>
<p>&#8220;&#8216;How can this be?&#8217; I cried.  He laughed and took the form of a phoenix; I fell back from the flames as he ascended to heaven, then sorrowed as he dove toward the Golden Water River, for the water would surely quench the bird.  Yet before reaching the water, he took the form of an eel, dove into the river and swam to the bank; he wriggled ashore, then took the form of a seed, which sank into the earth and grew into a mighty tree.  Finally he took his own form again and spoke to me: &#8216;I rule all things; things above the earth and in the earth and under the earth, land and sea and sky.  I can rule all these because I rule myself.&#8217;</p>
<p>&#8220;I woke and wondered at the singularity of the vision; when my mind reeled in amazement and could stand no more, it retreated to the familiar problem of the tables of changes.  It suddenly occurred to me that as the Emperor could take any form, there could be a table of changes that could take the form of any other.  Once I had conceived the idea, the implementation was straightforward.&#8221;</p>
<p>The rest of the letter has been lost, but Yang Hui described the broad form of the changes in a letter to a friend; the <em>Imperial Changes</em> were a set of changes that we now recognize as a Turing-complete programming language, nearly seven hundred years before Turing.  It was a type of register machine similar to Melzak&#8217;s model, where seeds were &#8216;planted&#8217; in pits; the lists of hexagrams generated by the yarrow straws were the programs, and the result of the computation was taken as the interpretation of the casting.  Zhu recognized that some programs never stopped&#8211;some went into infinite loops, some grew without bound, and some behaved so erratically he couldn&#8217;t decide whether they would ever give an interpretation.</p>
<p>Given his fascination with probabilities, it was natural that Zhu would consider the probability that a string of hexagrams had an interpretation.  We do not have Zhu&#8217;s reasoning, only an excerpt from his conclusion: &#8220;The probability that a list of hexagrams has an interpretation is a secret beyond the power of fate to reveal.&#8221;  It may be that Zhu anticipated Chaitin&#8217;s proof of the algorithmic randomness of this probability as well.</p>
<p>All of Zhu&#8217;s works were lost soon after they were published; <em>True reflections</em> survived in a corrupted form through Korean (1433 AD) and Japanese (1658 AD) translations and was reintroduced to China only in the nineteenth century.  One wonders what the world might have been like had the <em>Imperial Changes</em> been understood and exploited.  We suppose it is a secret beyond the power of fate to reveal.</p>
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		<title>Imaginary Time 2</title>
		<link>http://reperiendi.wordpress.com/2010/07/26/imaginary-time-2/</link>
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		<pubDate>Mon, 26 Jul 2010 14:40:37 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[General physics]]></category>
		<category><![CDATA[Math]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1461</guid>
		<description><![CDATA[Another part of the analogy I started here, but this time using inverse temperature instead of imaginary time. It describes a thermometer where a mass changes position with temperature. I&#8217;m guessing this stuff only applies when the temperature is changing adiabatically. Thermometer (unitless temperature): [1] inverse temperature (unitless) [m] y coordinate [kg/s^2 K] spring constant [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1461&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Another part of the analogy I started <a href="http://reperiendi.wordpress.com/2009/01/09/imaginary-time/">here</a>, but this time using inverse temperature instead of imaginary time.  It describes a thermometer where a mass changes position with temperature.  I&#8217;m guessing this stuff only applies when the temperature is changing adiabatically.</p>
<table border="0">
<tbody>
<tr>
<td><span style="text-decoration:underline;">Thermometer (unitless temperature):</span></td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%5Cbeta&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle &#92;beta' title='&#92;displaystyle &#92;beta' class='latex' /></td>
<td>[1]</td>
<td>inverse temperature (unitless)</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+y%28%5Cbeta%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle y(&#92;beta)' title='&#92;displaystyle y(&#92;beta)' class='latex' /></td>
<td>[m]</td>
<td>y coordinate</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+r&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle r' title='&#92;displaystyle r' class='latex' /></td>
<td>[kg/s^2 K]</td>
<td>spring constant * temp unit conversion</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+v%28%5Cbeta%29+%3D+%5Cfrac%7Bdy%28%5Cbeta%29%7D%7Bd%5Cbeta%7D&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle v(&#92;beta) = &#92;frac{dy(&#92;beta)}{d&#92;beta}' title='&#92;displaystyle v(&#92;beta) = &#92;frac{dy(&#92;beta)}{d&#92;beta}' class='latex' /></td>
<td>[m]</td>
<td>how position changes with (inverse) temperature</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+F%28%5Cbeta%29+%3D+r+%5C%3B+v%28%5Cbeta%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle F(&#92;beta) = r &#92;; v(&#92;beta)' title='&#92;displaystyle F(&#92;beta) = r &#92;; v(&#92;beta)' class='latex' /></td>
<td>[kg m/s^2 K]</td>
<td>force per Kelvin</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+T%28%5Cbeta%29+%3D+%5Cfrac%7Br%7D%7B2%7Dv%28%5Cbeta%29%5E2&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle T(&#92;beta) = &#92;frac{r}{2}v(&#92;beta)^2' title='&#92;displaystyle T(&#92;beta) = &#92;frac{r}{2}v(&#92;beta)^2' class='latex' /></td>
<td>[kg m^2/s^2 K]</td>
<td>stretching energy per Kelvin</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+V%28%5Cbeta%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle V(&#92;beta)' title='&#92;displaystyle V(&#92;beta)' class='latex' /></td>
<td>[kg m^2/s^2 K]</td>
<td>potential energy per Kelvin</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+S+%3D+%5Cint+%28T+%2B+V%29%28%5Cbeta%29+%5C%3B+d%5Cbeta&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle S = &#92;int (T + V)(&#92;beta) &#92;; d&#92;beta' title='&#92;displaystyle S = &#92;int (T + V)(&#92;beta) &#92;; d&#92;beta' class='latex' /></p>
<td>[kg m^2/s^2 K]</td>
<td>entropy</td>
</tr>
<tr>
<td><span style="text-decoration:underline;">Thermometer:</span></td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%5Cbeta&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle &#92;beta' title='&#92;displaystyle &#92;beta' class='latex' /></td>
<td>[1/K]</td>
<td>inverse temperature</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+y%28%5Cbeta%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle y(&#92;beta)' title='&#92;displaystyle y(&#92;beta)' class='latex' /></td>
<td>[m]</td>
<td>y coordinate</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+r&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle r' title='&#92;displaystyle r' class='latex' /></td>
<td>[kg/s^2 K^2 = bits/m^2 K]</td>
<td>how information density changes with temp</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+v%28%5Cbeta%29+%3D+%5Cfrac%7Bdy%28%5Cbeta%29%7D%7Bd%5Cbeta%7D&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle v(&#92;beta) = &#92;frac{dy(&#92;beta)}{d&#92;beta}' title='&#92;displaystyle v(&#92;beta) = &#92;frac{dy(&#92;beta)}{d&#92;beta}' class='latex' /></td>
<td>[m K]</td>
<td>how position changes with (inverse) temperature</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+F%28%5Cbeta%29+%3D+r+%5C%3B+v%28%5Cbeta%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle F(&#92;beta) = r &#92;; v(&#92;beta)' title='&#92;displaystyle F(&#92;beta) = r &#92;; v(&#92;beta)' class='latex' /></td>
<td>[kg m/s^2 K = bits/m]</td>
<td>force per Kelvin</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+T%28%5Cbeta%29+%3D+%5Cfrac%7Br%7D%7B2%7Dv%28%5Cbeta%29%5E2&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle T(&#92;beta) = &#92;frac{r}{2}v(&#92;beta)^2' title='&#92;displaystyle T(&#92;beta) = &#92;frac{r}{2}v(&#92;beta)^2' class='latex' /></td>
<td>[kg m^2/s^2 = bits K]</td>
<td>stretching energy = change in stretching information with invtemp</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+V%28%5Cbeta%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle V(&#92;beta)' title='&#92;displaystyle V(&#92;beta)' class='latex' /></td>
<td>[kg m^2/s^2 = bits K]</td>
<td>potential energy = change in potential information with invtemp</td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+S+%3D+%5Cint+%28T+%2B+V%29%28%5Cbeta%29+%5C%3B+d%5Cbeta&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle S = &#92;int (T + V)(&#92;beta) &#92;; d&#92;beta' title='&#92;displaystyle S = &#92;int (T + V)(&#92;beta) &#92;; d&#92;beta' class='latex' /></p>
<td>[bits]</td>
<td>entropy</td>
</tr>
</tbody>
</table>
<p>I assume that the dynamics of such a system would follow a path where <img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%5Cdelta+S%3D0%3B&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle &#92;delta S=0;' title='&#92;displaystyle &#92;delta S=0;' class='latex' /> is that a minimum-entropy path or a maximum?</p>
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		<title>An analogy</title>
		<link>http://reperiendi.wordpress.com/2010/07/24/an-analogy/</link>
		<comments>http://reperiendi.wordpress.com/2010/07/24/an-analogy/#comments</comments>
		<pubDate>Sat, 24 Jul 2010 20:58:22 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Math]]></category>
		<category><![CDATA[Quantum]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1419</guid>
		<description><![CDATA[Stat mech Quant mech column vector distribution amplitude distribution (wave function) row vector population , where are the coefficients that, when normalized, maximize the inner product with , where is the complex conjugate of . normalization transitions stochastic unitary harmonic oscillator many HOs at temperature one QHO evolving for time uniform distribution over states special [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1419&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<table border="1">
<tbody>
<tr>
<td width="20%"></td>
<td width="40%">Stat mech</td>
<td width="40%">Quant mech</td>
</tr>
<tr>
<td>column vector</td>
<td>distribution<br />
<img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%7Cp%5Crangle+%3D+%5Csum_j+p_j%7Cj%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle |p&#92;rangle = &#92;sum_j p_j|j&#92;rangle' title='&#92;displaystyle |p&#92;rangle = &#92;sum_j p_j|j&#92;rangle' class='latex' /></td>
<td>amplitude distribution (wave function)<br />
<img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%7C%5Cpsi%5Crangle+%3D+%5Csum_j+%5Cpsi_j+%7Cj%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle |&#92;psi&#92;rangle = &#92;sum_j &#92;psi_j |j&#92;rangle' title='&#92;displaystyle |&#92;psi&#92;rangle = &#92;sum_j &#92;psi_j |j&#92;rangle' class='latex' /></td>
</tr>
<tr>
<td>row vector</td>
<td>population<br />
<img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%5Clangle+p%7C+%3D+%5Csum_j+p%5E%2A_j+%5Clangle+j%7C&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle &#92;langle p| = &#92;sum_j p^*_j &#92;langle j|' title='&#92;displaystyle &#92;langle p| = &#92;sum_j p^*_j &#92;langle j|' class='latex' />,<br />
where <img src='http://s0.wp.com/latex.php?latex=p_j%5E%2A&amp;bg=fff&amp;fg=222&amp;s=0' alt='p_j^*' title='p_j^*' class='latex' /> are the coefficients that, when normalized, maximize the inner product with <img src='http://s0.wp.com/latex.php?latex=%7Cp%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='|p&#92;rangle' title='|p&#92;rangle' class='latex' /></td>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%5Clangle+%5Cpsi%7C+%3D+%5Csum_j+%5Cpsi_j%5E%2A+%5Clangle+j%7C&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle &#92;langle &#92;psi| = &#92;sum_j &#92;psi_j^* &#92;langle j|' title='&#92;displaystyle &#92;langle &#92;psi| = &#92;sum_j &#92;psi_j^* &#92;langle j|' class='latex' />,<br />
where <img src='http://s0.wp.com/latex.php?latex=%5Cpsi_j%5E%2A&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;psi_j^*' title='&#92;psi_j^*' class='latex' /> is the complex conjugate of <img src='http://s0.wp.com/latex.php?latex=%5Cpsi_j&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;psi_j' title='&#92;psi_j' class='latex' />.</td>
</tr>
<tr>
<td>normalization</td>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%5Csum_j+p_j+%3D+1&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle &#92;sum_j p_j = 1' title='&#92;displaystyle &#92;sum_j p_j = 1' class='latex' /></td>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%5Csum_j+%7C%5Cpsi_j%7C%5E2+%3D+1&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle &#92;sum_j |&#92;psi_j|^2 = 1' title='&#92;displaystyle &#92;sum_j |&#92;psi_j|^2 = 1' class='latex' /></td>
</tr>
<tr>
<td>transitions</td>
<td>stochastic</td>
<td>unitary</td>
</tr>
<tr>
<td>harmonic oscillator</td>
<td>many HOs at temperature <img src='http://s0.wp.com/latex.php?latex=T&amp;bg=fff&amp;fg=222&amp;s=0' alt='T' title='T' class='latex' /></td>
<td>one QHO evolving for time <img src='http://s0.wp.com/latex.php?latex=t&amp;bg=fff&amp;fg=222&amp;s=0' alt='t' title='t' class='latex' /></td>
</tr>
<tr>
<td>uniform distribution over <img src='http://s0.wp.com/latex.php?latex=n&amp;bg=fff&amp;fg=222&amp;s=0' alt='n' title='n' class='latex' /> states</td>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%7CU%5Crangle+%3D+%5Cfrac%7B1%7D%7Bn%7D%5Csum_j+%7Cj%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle |U&#92;rangle = &#92;frac{1}{n}&#92;sum_j |j&#92;rangle' title='&#92;displaystyle |U&#92;rangle = &#92;frac{1}{n}&#92;sum_j |j&#92;rangle' class='latex' /></td>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%7CU%5Crangle+%3D+%5Cfrac%7B1%7D%7B%5Csqrt%7Bn%7D%7D%5Csum_j+%7Cj%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle |U&#92;rangle = &#92;frac{1}{&#92;sqrt{n}}&#92;sum_j |j&#92;rangle' title='&#92;displaystyle |U&#92;rangle = &#92;frac{1}{&#92;sqrt{n}}&#92;sum_j |j&#92;rangle' class='latex' /></td>
</tr>
<tr>
<td>special distribution</td>
<td>Gibbs distribution <img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+p%28T%29+%3D+%5Csum_j+e%5E%7B-E_j+%2F+k_B+T%7D+%7Cj%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle p(T) = &#92;sum_j e^{-E_j / k_B T} |j&#92;rangle' title='&#92;displaystyle p(T) = &#92;sum_j e^{-E_j / k_B T} |j&#92;rangle' class='latex' /></td>
<td>Free evolution <img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%5Cpsi%28t%29+%3D+H%7CU%5Crangle+%3D+%5Csum_j+e%5E%7B-E_j+%5C%3B+it%2F%5Chbar%7D+%7Cj%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle &#92;psi(t) = H|U&#92;rangle = &#92;sum_j e^{-E_j &#92;; it/&#92;hbar} |j&#92;rangle' title='&#92;displaystyle &#92;psi(t) = H|U&#92;rangle = &#92;sum_j e^{-E_j &#92;; it/&#92;hbar} |j&#92;rangle' class='latex' /></td>
</tr>
<tr>
<td>partition function = inner product with <img src='http://s0.wp.com/latex.php?latex=%5Clangle+U%7C&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;langle U|' title='&#92;langle U|' class='latex' /></td>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+Z%28T%29+%3D+%5Clangle+U%7Cp%28T%29%5Crangle+%3D+%5Cfrac%7B1%7D%7Bn%7D%5Csum_j+e%5E%7B-E_j+%2F+k_B+T%7D&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle Z(T) = &#92;langle U|p(T)&#92;rangle = &#92;frac{1}{n}&#92;sum_j e^{-E_j / k_B T}' title='&#92;displaystyle Z(T) = &#92;langle U|p(T)&#92;rangle = &#92;frac{1}{n}&#92;sum_j e^{-E_j / k_B T}' class='latex' /></td>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+Z%28t%29+%3D+%5Clangle+U%7C%5Cpsi%28t%29%5Crangle+%3D+%5Cfrac%7B1%7D%7B%5Csqrt%7Bn%7D%7D%5Csum_j+e%5E%7B-E_j+%5C%3B+it%2Fhbar%7D&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle Z(t) = &#92;langle U|&#92;psi(t)&#92;rangle = &#92;frac{1}{&#92;sqrt{n}}&#92;sum_j e^{-E_j &#92;; it/hbar}' title='&#92;displaystyle Z(t) = &#92;langle U|&#92;psi(t)&#92;rangle = &#92;frac{1}{&#92;sqrt{n}}&#92;sum_j e^{-E_j &#92;; it/hbar}' class='latex' /></td>
</tr>
<tr>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%5Clangle+Q%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle &#92;langle Q&#92;rangle' title='&#92;displaystyle &#92;langle Q&#92;rangle' class='latex' /></td>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%3D+%5Cfrac%7B1%7D%7BZ%28T%29%7D%5Clangle+U%7C+%5C%3B+%7CQp%28T%29%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle = &#92;frac{1}{Z(T)}&#92;langle U| &#92;; |Qp(T)&#92;rangle' title='&#92;displaystyle = &#92;frac{1}{Z(T)}&#92;langle U| &#92;; |Qp(T)&#92;rangle' class='latex' /></td>
<td><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+%3D+%5Cfrac%7B1%7D%7BZ%28t%29%7D%5Clangle+U%7C+%5C%3B+%7CQ%5Cpsi%28t%29%5Crangle&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle = &#92;frac{1}{Z(t)}&#92;langle U| &#92;; |Q&#92;psi(t)&#92;rangle' title='&#92;displaystyle = &#92;frac{1}{Z(t)}&#92;langle U| &#92;; |Q&#92;psi(t)&#92;rangle' class='latex' /></td>
</tr>
<tr>
<td>path integrals</td>
<td><img src='http://s0.wp.com/latex.php?latex=E%2FT&amp;bg=fff&amp;fg=222&amp;s=0' alt='E/T' title='E/T' class='latex' /> = maximum entropy?</td>
<td><img src='http://s0.wp.com/latex.php?latex=Et&amp;bg=fff&amp;fg=222&amp;s=0' alt='Et' title='Et' class='latex' /> = least action?</td>
</tr>
</tbody>
</table>
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		<title>Scimitry</title>
		<link>http://reperiendi.wordpress.com/2010/07/19/cuts/</link>
		<comments>http://reperiendi.wordpress.com/2010/07/19/cuts/#comments</comments>
		<pubDate>Mon, 19 Jul 2010 21:58:59 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1409</guid>
		<description><![CDATA[Scimitry: the property that something remains the same after part has been cut off.  The Serpinski triangle is scimitric, since you can cut off the bottom two triangles and be left with something isomorphic to the whole.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1409&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Scimitry: the property that something remains the same after part has been cut off.  The Serpinski triangle is scimitric, since you can cut off the bottom two triangles and be left with something isomorphic to the whole.</p>
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		<title>Entropic gravity</title>
		<link>http://reperiendi.wordpress.com/2010/07/19/entropic-gravity/</link>
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		<pubDate>Mon, 19 Jul 2010 19:07:02 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Astronomy]]></category>
		<category><![CDATA[General physics]]></category>
		<category><![CDATA[Math]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1406</guid>
		<description><![CDATA[Erik Verlinde has been in the news recently for revisiting Ted Jacobson&#8217;s suggestion that gravity is an entropic force rather than a fundamental one. The core of the argument is as follows: Say we have two boxes, one inside the other: +---------------+ &#124; &#124; &#124; +----------+ &#124; &#124; &#124; &#124; &#124; &#124; &#124; &#124; &#124; [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1406&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Erik Verlinde has been in the news recently for revisiting Ted Jacobson&#8217;s suggestion that gravity is an entropic force rather than a fundamental one.  The core of the argument is as follows:</p>
<p>Say we have two boxes, one inside the other:</p>
<pre>+---------------+
|               |
| +----------+  |
| |          |  |
| |          |  |
| |          |  |
| +----------+  |
+---------------+</pre>
<p>Say the inner box has room for ten bits on its surface and the outer one room for twenty.  Each box can use as many &#8220;1&#8243;s as there are particles inside it:</p>
<pre>+---------------+
|      X        |
| +----------+  |
| |          |  |
| |  X       |  |
| |          |  |
| +----------+  |
+---------------+</pre>
<p>In this case, the inner box has only one particle inside, so there are 10 choose 1 = 10 ways to choose a labeling of the inner box;  the outer box has two particles inside, so there are 20 choose 2 = 190 ways.  Thus there are 1900 ways to label the system in all.</p>
<p>If both particles are in the inner box, though, the number of ways increases:</p>
<pre>+---------------+
|               |
| +----------+  |
| |          |  |
| |  X  X    |  |
| |          |  |
| +----------+  |
+---------------+</pre>
<p>The inner box now has 10 choose 2 ways = 45, while the outer box still has 190.  So using the standard assumption that all labelings are equally likely, it&#8217;s 4.5 times as likely to find both particles in the inner box, and we get an entropic force drawing them together.</p>
<p>The best explanation of Verlinde&#8217;s paper I&#8217;ve seen is Sabine Hossenfelder&#8217;s <a href="http://arxiv.org/abs/1003.1015">Comments on and Comments on Comments on Verlinde’s paper “On the Origin of Gravity and the Laws of Newton”</a>.</p>
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		<title>A first attempt at re-winding Escher&#8217;s &#8220;Ascending and Descending&#8221;</title>
		<link>http://reperiendi.wordpress.com/2010/05/19/a-first-attempt-at-re-winding-eshers-ascending-and-descending/</link>
		<comments>http://reperiendi.wordpress.com/2010/05/19/a-first-attempt-at-re-winding-eshers-ascending-and-descending/#comments</comments>
		<pubDate>Wed, 19 May 2010 22:44:35 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1394</guid>
		<description><![CDATA[And he dreamed, and behold a ladder set up on the earth, and the top of it reached to heaven: and behold the angels of God ascending and descending on it. Edit (May 20): Even though it&#8217;s not a conformal transformation, this version looks better in a lot of ways. Rather than cramming the whole [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1394&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<blockquote><p>And he dreamed, and behold a ladder set up on the earth, and the top of it reached to heaven: and behold the angels of God ascending and descending on it. </p></blockquote>
<p><a href="http://reperiendi.files.wordpress.com/2010/05/canvas.png"><img src="http://reperiendi.files.wordpress.com/2010/05/canvas.png?w=720&#038;h=875" alt="" title="canvas" width="720" height="875" class="alignnone size-full wp-image-1393" /></a></p>
<p>Edit (May 20):</p>
<p>Even though it&#8217;s not a conformal transformation, this version looks better in a lot of ways.</p>
<p><a href="http://reperiendi.files.wordpress.com/2010/05/picture-1.png"><img src="http://reperiendi.files.wordpress.com/2010/05/picture-1.png?w=720" alt="" title="Winding"   class="alignnone size-full wp-image-1399" /></a></p>
<p>Rather than cramming the whole picture into a single window frame, it presumes there&#8217;s a concentric set of these castles, each half as small as the previous, and built within its open internal patio.  Doing it really well would involve extending the walls out to the edge of the outer wall that obscures them.</p>
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		<title>I&#8217;m not this guy</title>
		<link>http://reperiendi.wordpress.com/2010/05/18/im-not-this-guy/</link>
		<comments>http://reperiendi.wordpress.com/2010/05/18/im-not-this-guy/#comments</comments>
		<pubDate>Tue, 18 May 2010 21:29:39 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1389</guid>
		<description><![CDATA[https://mikestay.wordpress.com/<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1389&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><a href="https://mikestay.wordpress.com/">https://mikestay.wordpress.com/</a></p>
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		<title>Faith</title>
		<link>http://reperiendi.wordpress.com/2010/05/13/faith/</link>
		<comments>http://reperiendi.wordpress.com/2010/05/13/faith/#comments</comments>
		<pubDate>Fri, 14 May 2010 00:28:29 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1386</guid>
		<description><![CDATA[Blind faith is the best antisceptic.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1386&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Blind faith is the best antisceptic.</p>
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		<title>Tag clouds</title>
		<link>http://reperiendi.wordpress.com/2010/05/07/tag-clouds/</link>
		<comments>http://reperiendi.wordpress.com/2010/05/07/tag-clouds/#comments</comments>
		<pubDate>Sat, 08 May 2010 00:27:15 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1360</guid>
		<description><![CDATA[Tag clouds are cumulonymous.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1360&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p><a href="http://tagcrowd.com/">Tag clouds</a> are cumulonymous.</p>
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		<title>Soliton</title>
		<link>http://reperiendi.wordpress.com/2010/05/07/soliton/</link>
		<comments>http://reperiendi.wordpress.com/2010/05/07/soliton/#comments</comments>
		<pubDate>Fri, 07 May 2010 21:21:53 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Poetry]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1356</guid>
		<description><![CDATA[With a stroke, the pilot glides forward across the lake. He does not know the names of the vortices cast off by his oar; Neither is he known to the Sun.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1356&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>With a stroke, the pilot glides forward across the lake.<br />
He does not know the names of the vortices cast off by his oar;<br />
Neither is he known to the Sun.</p>
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		<title>Simple activity for teaching about radiometric dating</title>
		<link>http://reperiendi.wordpress.com/2010/05/03/simple-activity-for-teaching-about-radiometric-dataing/</link>
		<comments>http://reperiendi.wordpress.com/2010/05/03/simple-activity-for-teaching-about-radiometric-dataing/#comments</comments>
		<pubDate>Tue, 04 May 2010 01:13:03 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[General physics]]></category>
		<category><![CDATA[Quantum]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1342</guid>
		<description><![CDATA[This works best with small groups of about 5-10 students and at least thirty dice. Divide the dice evenly among the students. Count the number of dice held by the students and write it on the board. Have everyone roll each die once. Collect all the dice that show a &#8216;one&#8217;, count them, write the [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1342&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>This works best with small groups of about 5-10 students and at least thirty dice.  Divide the dice evenly among the students.</p>
<ol>
<li>Count the number of dice held by the students and write it on the board.
<li>Have everyone roll each die once.
<li>Collect all the dice that show a &#8216;one&#8217;, count them, write the sum on the board, then set them aside.
<li>Go back to step 1.
</ol>
<p>A run with 30 dice will look something like this:</p>
<table border="1">
<tr>
<td>dice</td>
<td>number of ones</td>
</tr>
<tr>
<td>30</td>
<td>5</td>
</tr>
<tr>
<td>25</td>
<td>4</td>
</tr>
<tr>
<td>21</td>
<td>4</td>
</tr>
<tr>
<td>17</td>
<td>3</td>
</tr>
<tr>
<td>14</td>
<td>1</td>
</tr>
<tr>
<td>13</td>
<td>3</td>
</tr>
<tr>
<td>10</td>
<td>2</td>
</tr>
<tr>
<td>8</td>
<td>1</td>
</tr>
<tr>
<td>7</td>
<td>1</td>
</tr>
<tr>
<td>6</td>
<td>0</td>
</tr>
<tr>
<td>6</td>
<td>1</td>
</tr>
<tr>
<td>5</td>
<td>0</td>
</tr>
<tr>
<td>5</td>
<td>1</td>
</tr>
<tr>
<td>4</td>
<td>1</td>
</tr>
<tr>
<td>3</td>
<td>0</td>
</tr>
<tr>
<td>3</td>
<td>0</td>
</tr>
<tr>
<td>3</td>
<td>0</td>
</tr>
<tr>
<td>3</td>
<td>1</td>
</tr>
<tr>
<td>2</td>
<td>1</td>
</tr>
<tr>
<td>1</td>
<td>0</td>
</tr>
<tr>
<td>1</td>
<td>0</td>
</tr>
<tr>
<td>1</td>
<td>0</td>
</tr>
<tr>
<td>1</td>
<td>0</td>
</tr>
<tr>
<td>1</td>
<td>1</td>
</tr>
</table>
<p>Point out how the number of dice rolling a one on each turn is about one sixth of the dice that hadn&#8217;t yet rolled a one on the previous turn.  Also, that you lose about half of the remaining dice after about four turns.  </p>
<p>Send someone out of the room; do either four or eight turns, then bring them back and ask them to guess how many turns the group took.  The student should be able to see that if half the dice are left, there were only four turns, but if a quarter of the dice are left, there were eight turns.</p>
<p>If the students are advanced enough to use logarithms, try the above with some number other than four or eight and have the student use logarithms to calculate the number of turns:  </p>
<p align="center">turns = log(number remaining/total) / log(5/6),</p>
<p>or, equivalently, in terms of the <a href="http://en.wikipedia.org/wiki/Half_life">half-life</a> (which is really closer to 3.8 than 4):</p>
<p align="center">turns = 3.8 * log(number remaining/total) / log(1/2).</p>
<p>When <a href="http://en.wikipedia.org/wiki/Zircon">Zircon</a> crystals form, they strongly reject lead atoms: new zircon crystals have no lead in them.  They easily accept uranium atoms.  Each die represents a uranium atom, and rolling a one represents decaying into a lead atom: because uranium atoms are radioactive, they can lose bits of their nucleus and turn into lead&#8211;but only randomly, like rolling a die.  Instead of four turns, the half-life of U238 is <a href="http://en.wikipedia.org/wiki/Uranium-lead_dating">4.5 billion years</a>.</p>
<p>Zircon forms in almost all rocks and is hard to break down.  So to judge the age of a rock, you get the zircon out, throw it in a mass spectrometer, look at the proportion of uranium to (lead plus uranium) and calculate</p>
<p align="center">years = 4.5 billion * log(mass of uranium/mass of (lead+uranium)) / log(1/2).</p>
<p>Problem: given a zircon crystal where there&#8217;s one lead atom for every ninety-nine uranium atoms, how long ago was it formed?</p>
<p align="center">4.5 billion * log(99/100) / log(1/2) = 65 million years ago.</p>
<p>In reality, it&#8217;s slightly more complicated: there are two isotopes of uranium and several of lead.  But this is a good thing, since we know the half-lives of both isotopes and can use them to cross-check each other; it&#8217;s as though each student had both six- and twenty-sided dice, and the student guessing the number of turns could use information from both groups to refine her guess.</p>
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		<title>Escher and Mandelbrot</title>
		<link>http://reperiendi.wordpress.com/2010/05/03/escher-and-mandelbrot/</link>
		<comments>http://reperiendi.wordpress.com/2010/05/03/escher-and-mandelbrot/#comments</comments>
		<pubDate>Mon, 03 May 2010 21:43:30 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Math]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1331</guid>
		<description><![CDATA[If you take a complex number z with argument &#952; and square it, you double &#952;. The Mandelbrot/Julia iteration z &#x21a6; z2 + c does pretty much the same thing, but adds wiggles to the curve. Since the iterations stop when &#124;z&#124; &#62; 2, the boundary at the zeroth iteration is a circle; after the [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1331&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>If you take a complex number <i>z</i> with argument <em>&theta;</em> and square it, you double <em>&theta;</em>.  The Mandelbrot/Julia iteration</p>
<p align="center"><em>z &#x21a6; z<sup>2</sup> + c</em></p>
<p>does pretty much the same thing, but adds wiggles to the curve.  Since the iterations stop when |<em>z</em>| &gt; 2, the boundary at the zeroth iteration is a circle; after the first it&#8217;s a pear shape, and so on.  We can map any point in the region between bands to a point in a rectangular tile that&#8217;s periodic once along the outside edge and twice along the inside edge.  Here&#8217;s a <a href="http://web.archive.org/web/20030504051714/www.tantric.demon.co.uk/mayan.html">site</a> with a <a href="http://web.archive.org/web/20030210224740/www.tantric.demon.co.uk/mce.html">few</a> <a href="http://web.archive.org/web/20030213042741/www.tantric.demon.co.uk/celt.html">different</a> <a href="http://web.archive.org/web/20030410020633/www.tantric.demon.co.uk/reptl.html">examples</a>.</p>
<p>The <a href="http://escherdroste.math.leidenuniv.nl/">transformation Escher used in &#8220;Print Gallery&#8221;</a> takes concentric circles at <em>r</em>=1/r<sup><em>n</em></sup> to a logarithmic spiral.  The concentric boundaries between iterations for the Julia set at <em>c</em> = 0 are circles.  There ought to be a transformation for Mandelbrot / Julia sets similar to the Droste effect but spiraling inward so that the frequency is smoothly increasing just as the <a href="http://linas.org/art-gallery/escape/smooth.html">distance can be made to smoothly increase</a>.</p>
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		<title>The animated gif of Dorian Grey</title>
		<link>http://reperiendi.wordpress.com/2010/05/03/the-animated-gif-of-dorian-grey/</link>
		<comments>http://reperiendi.wordpress.com/2010/05/03/the-animated-gif-of-dorian-grey/#comments</comments>
		<pubDate>Mon, 03 May 2010 20:45:21 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1328</guid>
		<description><![CDATA[My friend Jas wrote a Perl module, Perl::Visualize, that makes Perl/Gif polyglots. He later adapted his technique to Javascript/Gif polyglots. Some guy generalized a quine to print out the source code of the program together with a comment containing the next frame in Conway&#8217;s Game of Life. So we have programs that can age themselves, [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1328&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>My friend Jas wrote a Perl module, <a>Perl::Visualize</a>, that makes Perl/Gif <a href="http://en.wikipedia.org/wiki/Polyglot_(computing)">polyglots</a>.  He later adapted his technique to <a href="http://www.thinkfu.com/blog/gifjavascript-polyglots">Javascript/Gif polyglots</a>.  Some guy generalized a quine to print out the source code of the program together with a comment containing the <a href="http://igoro.com/archive/self-printing-game-of-life-in-c/">next frame in Conway&#8217;s Game of Life</a>.  So we have programs that can age themselves, as well as programs that double as pictures.  The &#8220;aging&#8221; process can repeat.  So someone make a JS/Gif polyglot quine that renders consecutive frames of <a href="http://img.photobucket.com/albums/v635/DavesWorld56/HalloweenGifs/PictureOfDorianGreyClrFade.gif">Dorian Grey</a>!</p>
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		<title>Lazulinos</title>
		<link>http://reperiendi.wordpress.com/2010/04/27/lazulinos/</link>
		<comments>http://reperiendi.wordpress.com/2010/04/27/lazulinos/#comments</comments>
		<pubDate>Tue, 27 Apr 2010 21:12:59 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Borges]]></category>
		<category><![CDATA[Fun links]]></category>
		<category><![CDATA[General physics]]></category>
		<category><![CDATA[Perception]]></category>
		<category><![CDATA[Quantum]]></category>

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		<description><![CDATA[Lazulinos are quasiparticles in a naturally occurring Bose-Einstein condensate first described in 1977 by the Scottish physicist Alexander Craigie while at the University of Lahore [3]. The quasiparticles are weakly bound by an interaction for which neither the position nor number operator commutes with the Hamiltonian. A measurement of a lazulino’s position will cause the [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1312&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Lazulinos are quasiparticles in a naturally occurring Bose-Einstein condensate first described in 1977 by the Scottish physicist Alexander Craigie while at the University of Lahore [3].  The quasiparticles are weakly bound by an interaction for which neither the position nor number operator commutes with the Hamiltonian.  A measurement of a lazulino’s position will cause the condensate to go into a superposition of number states, and a subsequent measurement of the population will return a random number; also, counting the lazulinos at two different times will likely give different results.  </p>
<p>Their name derives from the stone <i>lapis lazuli</i> and means, roughly, &#8220;little blue stone&#8221;.  Lazulinos are so named because even though the crystals in which they arise absorb visible light, and would otherwise be jet black, they lose energy through surface plasmons in the form of near-ultraviolet photons, with visible peaks at 380, 402, and 417nm.  Optical interference imparts a &#8220;laser speckle&#8221; quality to the emitted light; Craigie described the effect in a famously poetic way: &#8220;Their colour is the blue that we are permitted to see only in our dreams&#8221;.  What makes lazulinos particularly interesting is that they are massive and macroscopic.  Since the number operator does not commute with the Hamiltonian, lazulinos themselves do not have a well-defined mass; if the population is <i>N</i>, then the mass of any particular lazulino is <i>m</i>/<i>N</i>, where <i>m</i> is the total mass of the condensate.</p>
<p>In a recent follow-up to the &#8220;quantum mirage&#8221; experiment [2],  Don Eigler&#8217;s group at IBM used a scanning tunneling microscope to implement &#8220;quantum mancala&#8221;&#8212;picking up the lazulino &#8216;stones&#8217; in a particular location usually changes the number of stones, so the strategy for winning becomes much more complicated.  In order to pick up a fixed number of stones, you must choose a superposition of locations [1].   </p>
<ol>
<li>C.P. Lutz and D.M. Eigler, &#8220;Quantum Mancala: Manipulating Lazulino Condensates,&#8221; Nature 465, 132 (2010).
<li>H.C. Manoharan, C.P. Lutz and D.M. Eigler, &#8220;Quantum Mirages: The Coherent Projection of Electronic Structure,&#8221; Nature 403, 512 (2000).  Images available at <a href="http://www.almaden.ibm.com/almaden/media/image_mirage.html">http://www.almaden.ibm.com/almaden/media/image_mirage.html</a>
<li>A. Craigie, &#8220;Surface plasmons in cobalt-doped Y<sub>3</sub>Al<sub>5</sub>O<sub>12</sub>,&#8221; Phys. Rev. D 15 (1977).  Also available at <a href="http://tinyurl.com/35oyrnd">http://tinyurl.com/35oyrnd</a>.
</ol>
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		<title>NY Times article on conditional probability</title>
		<link>http://reperiendi.wordpress.com/2010/04/27/ny-times-article-on-conditional-probability/</link>
		<comments>http://reperiendi.wordpress.com/2010/04/27/ny-times-article-on-conditional-probability/#comments</comments>
		<pubDate>Tue, 27 Apr 2010 13:36:27 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1309</guid>
		<description><![CDATA[There&#8217;s actually very good justification for this method of reasoning: it maximizes entropy.<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1309&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>There&#8217;s actually very good justification for <a href="http://opinionator.blogs.nytimes.com/2010/04/25/chances-are/">this method of reasoning</a>: it maximizes entropy.</p>
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		<title>Coends</title>
		<link>http://reperiendi.wordpress.com/2010/04/11/coends/</link>
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		<pubDate>Mon, 12 Apr 2010 05:26:12 +0000</pubDate>
		<dc:creator>Mike Stay</dc:creator>
				<category><![CDATA[Category theory]]></category>
		<category><![CDATA[Math]]></category>
		<category><![CDATA[Quantum]]></category>

		<guid isPermaLink="false">http://reperiendi.wordpress.com/?p=1282</guid>
		<description><![CDATA[Coends are a categorified version of &#8220;summing over repeated indices&#8221;. We do that when we&#8217;re computing the trace of a matrix and when we&#8217;re multiplying two matrices. It&#8217;s categorified because we&#8217;re summing over a bunch of sets instead of a bunch of numbers. Let be a small category. The functor assigns to each pair of [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=reperiendi.wordpress.com&amp;blog=925435&amp;post=1282&amp;subd=reperiendi&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Coends are a categorified version of &#8220;summing over repeated indices&#8221;.  We do that when we&#8217;re computing the trace of a matrix and when we&#8217;re multiplying two matrices.  It&#8217;s categorified because we&#8217;re summing over a bunch of sets instead of a bunch of numbers.</p>
<p>Let <img src='http://s0.wp.com/latex.php?latex=C&amp;bg=fff&amp;fg=222&amp;s=0' alt='C' title='C' class='latex' /> be a small category.  The functor <img src='http://s0.wp.com/latex.php?latex=%5Cmbox%7Bhom%7D%3AC%5E%7B%5Cmbox%7Bop%7D%7D+%5Ctimes+C+%5Cto+Set&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;mbox{hom}:C^{&#92;mbox{op}} &#92;times C &#92;to Set' title='&#92;mbox{hom}:C^{&#92;mbox{op}} &#92;times C &#92;to Set' class='latex' /> assigns</p>
<ul>
<li>to each pair of objects the set of morphisms between them, and
<li>to each pair of morphisms <img src='http://s0.wp.com/latex.php?latex=%28f%3Ac+%5Cto+c%27%2C+h%3Ad%5Cto+d%27%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='(f:c &#92;to c&#039;, h:d&#92;to d&#039;)' title='(f:c &#92;to c&#039;, h:d&#92;to d&#039;)' class='latex' /> a function that takes a morphism <img src='http://s0.wp.com/latex.php?latex=g+%5Cin+%5Cmbox%7Bhom%7D%28c%27%2C+d%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='g &#92;in &#92;mbox{hom}(c&#039;, d)' title='g &#92;in &#92;mbox{hom}(c&#039;, d)' class='latex' /> and returns the composite morphism <img src='http://s0.wp.com/latex.php?latex=h+%5Ccirc+g+%5Ccirc+f+%5Cin+%5Cmbox%7Bhom%7D%28c%2C+d%27%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='h &#92;circ g &#92;circ f &#92;in &#92;mbox{hom}(c, d&#039;)' title='h &#92;circ g &#92;circ f &#92;in &#92;mbox{hom}(c, d&#039;)' class='latex' />, where <img src='http://s0.wp.com/latex.php?latex=c%2C+c%27%2C+d%2C+d%27+%5Cin+%5Cmbox%7BOb%7D%28C%29.&amp;bg=fff&amp;fg=222&amp;s=0' alt='c, c&#039;, d, d&#039; &#92;in &#92;mbox{Ob}(C).' title='c, c&#039;, d, d&#039; &#92;in &#92;mbox{Ob}(C).' class='latex' />
</ul>
<p>It turns out that given any functor <img src='http://s0.wp.com/latex.php?latex=S%3AC%5E%7B%5Cmbox%7Bop%7D%7D+%5Ctimes+D+%5Cto+%5Cmbox%7BSet%7D%2C&amp;bg=fff&amp;fg=222&amp;s=0' alt='S:C^{&#92;mbox{op}} &#92;times D &#92;to &#92;mbox{Set},' title='S:C^{&#92;mbox{op}} &#92;times D &#92;to &#92;mbox{Set},' class='latex' /> we can make a new category where <img src='http://s0.wp.com/latex.php?latex=C&amp;bg=fff&amp;fg=222&amp;s=0' alt='C' title='C' class='latex' /> and <img src='http://s0.wp.com/latex.php?latex=D&amp;bg=fff&amp;fg=222&amp;s=0' alt='D' title='D' class='latex' /> are subcategories and <img src='http://s0.wp.com/latex.php?latex=S&amp;bg=fff&amp;fg=222&amp;s=0' alt='S' title='S' class='latex' /> is actually the hom functor; some keywords for more information on this are &#8220;collages&#8221; and &#8220;Artin glueing&#8221;.  So we can also think of <img src='http://s0.wp.com/latex.php?latex=S&amp;bg=fff&amp;fg=222&amp;s=0' alt='S' title='S' class='latex' /> as assigning</p>
<ul>
<li>to each pair of objects a set of morphisms between them, and
<li>to each pair of morphisms <img src='http://s0.wp.com/latex.php?latex=%28f%3Ac+%5Cto+c%27%2C+h%3Ad%5Cto+d%27%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='(f:c &#92;to c&#039;, h:d&#92;to d&#039;)' title='(f:c &#92;to c&#039;, h:d&#92;to d&#039;)' class='latex' /> a function that takes a morphism <img src='http://s0.wp.com/latex.php?latex=g+%5Cin+S%28c%27%2C+d%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='g &#92;in S(c&#039;, d)' title='g &#92;in S(c&#039;, d)' class='latex' /> and returns the composite morphism <img src='http://s0.wp.com/latex.php?latex=h+%5Ccirc+g+%5Ccirc+f+%5Cin+S%28c%2C+d%27%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='h &#92;circ g &#92;circ f &#92;in S(c, d&#039;)' title='h &#92;circ g &#92;circ f &#92;in S(c, d&#039;)' class='latex' />, where <img src='http://s0.wp.com/latex.php?latex=c%2Cc%27+%5Cin+%5Cmbox%7BOb%7D%28C%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='c,c&#039; &#92;in &#92;mbox{Ob}(C)' title='c,c&#039; &#92;in &#92;mbox{Ob}(C)' class='latex' /> and <img src='http://s0.wp.com/latex.php?latex=d%2Cd%27+%5Cin+%5Cmbox%7BOb%7D%28D%29.&amp;bg=fff&amp;fg=222&amp;s=0' alt='d,d&#039; &#92;in &#92;mbox{Ob}(D).' title='d,d&#039; &#92;in &#92;mbox{Ob}(D).' class='latex' />
</ul>
<p>We can think of these functors as adjacency matrices, where the two parameters are the row and column, except that instead of counting the number of paths, we&#8217;re taking the set of paths.  So <img src='http://s0.wp.com/latex.php?latex=S&amp;bg=fff&amp;fg=222&amp;s=0' alt='S' title='S' class='latex' /> is kind of like a matrix whose elements are sets, and we want to do something like sum the diagonals.</p>
<p>The coend of <img src='http://s0.wp.com/latex.php?latex=S&amp;bg=fff&amp;fg=222&amp;s=0' alt='S' title='S' class='latex' /> is the coequalizer of the diagram</p>
<p align="center"><img src='http://s0.wp.com/latex.php?latex=%5Cbegin%7Barray%7D%7Bc%7D%5Cdisplaystyle+%5Ccoprod_%7Bf%3Ac+%5Cto+c%27%7D+S%28c%27%2C+c%29+%5C%5C+%5C%5C+%5Cdisplaystyle+S%28f%2C+c%29+%5Cdownarrow+%5Cquad+%5Cquad+%5Cdownarrow+S%28c%27%2C+f%29+%5C%5C+%5C%5C+%5Cdisplaystyle+%5Ccoprod_c+S%28c%2C+c%29+%5Cend%7Barray%7D&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;begin{array}{c}&#92;displaystyle &#92;coprod_{f:c &#92;to c&#039;} S(c&#039;, c) &#92;&#92; &#92;&#92; &#92;displaystyle S(f, c) &#92;downarrow &#92;quad &#92;quad &#92;downarrow S(c&#039;, f) &#92;&#92; &#92;&#92; &#92;displaystyle &#92;coprod_c S(c, c) &#92;end{array}' title='&#92;begin{array}{c}&#92;displaystyle &#92;coprod_{f:c &#92;to c&#039;} S(c&#039;, c) &#92;&#92; &#92;&#92; &#92;displaystyle S(f, c) &#92;downarrow &#92;quad &#92;quad &#92;downarrow S(c&#039;, f) &#92;&#92; &#92;&#92; &#92;displaystyle &#92;coprod_c S(c, c) &#92;end{array}' class='latex' /></p>
<p>The top set consists of all the pairs where</p>
<ul>
<li>the first element is a morphism <img src='http://s0.wp.com/latex.php?latex=f+%5Cin+%5Cmbox%7Bhom%7D%28c%2C+c%27%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='f &#92;in &#92;mbox{hom}(c, c&#039;)' title='f &#92;in &#92;mbox{hom}(c, c&#039;)' class='latex' /> and
<li>the second element is a morphism <img src='http://s0.wp.com/latex.php?latex=g+%5Cin+S%28c%27%2C+c%29.&amp;bg=fff&amp;fg=222&amp;s=0' alt='g &#92;in S(c&#039;, c).' title='g &#92;in S(c&#039;, c).' class='latex' />
</ul>
<p>The bottom set is the set of all the endomorphisms in <img src='http://s0.wp.com/latex.php?latex=S.&amp;bg=fff&amp;fg=222&amp;s=0' alt='S.' title='S.' class='latex' /></p>
<p>The coequalizer of the diagram, the coend of <img src='http://s0.wp.com/latex.php?latex=S%2C&amp;bg=fff&amp;fg=222&amp;s=0' alt='S,' title='S,' class='latex' /> is the bottom set modulo a relation.  Starting at the top with a pair <img src='http://s0.wp.com/latex.php?latex=%28f%2C+g%29%2C&amp;bg=fff&amp;fg=222&amp;s=0' alt='(f, g),' title='(f, g),' class='latex' /> the two arrows give the relation</p>
<p align="center"><img src='http://s0.wp.com/latex.php?latex=%5Cdisplaystyle+c+%5Cstackrel%7Bf%7D%7B%5Cto%7D+c%27+%5Cstackrel%7Bg%7D%7B%5Cmultimap%7D+c+%5Cstackrel%7Bc%7D%7B%5Cto%7D+c+%5Cquad+%5Csim+%5Cquad+c%27+%5Cstackrel%7Bc%27%7D%7B%5Cto%7D+c%27+%5Cstackrel%7Bg%7D%7B%5Cmultimap%7D+c+%5Cstackrel%7Bf%7D%7B%5Cto%7D+c%27%2C&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;displaystyle c &#92;stackrel{f}{&#92;to} c&#039; &#92;stackrel{g}{&#92;multimap} c &#92;stackrel{c}{&#92;to} c &#92;quad &#92;sim &#92;quad c&#039; &#92;stackrel{c&#039;}{&#92;to} c&#039; &#92;stackrel{g}{&#92;multimap} c &#92;stackrel{f}{&#92;to} c&#039;,' title='&#92;displaystyle c &#92;stackrel{f}{&#92;to} c&#039; &#92;stackrel{g}{&#92;multimap} c &#92;stackrel{c}{&#92;to} c &#92;quad &#92;sim &#92;quad c&#039; &#92;stackrel{c&#039;}{&#92;to} c&#039; &#92;stackrel{g}{&#92;multimap} c &#92;stackrel{f}{&#92;to} c&#039;,' class='latex' /></p>
<p>where I&#8217;m using the lollipop to mean a morphism from <img src='http://s0.wp.com/latex.php?latex=S.&amp;bg=fff&amp;fg=222&amp;s=0' alt='S.' title='S.' class='latex' />  </p>
<p>So this says take all the endomorphisms that can be chopped up into a morphism <img src='http://s0.wp.com/latex.php?latex=f&amp;bg=fff&amp;fg=222&amp;s=0' alt='f' title='f' class='latex' /> from <img src='http://s0.wp.com/latex.php?latex=%5Cmbox%7Bhom%7D&amp;bg=fff&amp;fg=222&amp;s=0' alt='&#92;mbox{hom}' title='&#92;mbox{hom}' class='latex' /> going one way and a <img src='http://s0.wp.com/latex.php?latex=g&amp;bg=fff&amp;fg=222&amp;s=0' alt='g' title='g' class='latex' /> from <img src='http://s0.wp.com/latex.php?latex=S&amp;bg=fff&amp;fg=222&amp;s=0' alt='S' title='S' class='latex' /> going the other, and then set <img src='http://s0.wp.com/latex.php?latex=fg+%5Csim+gf.&amp;bg=fff&amp;fg=222&amp;s=0' alt='fg &#92;sim gf.' title='fg &#92;sim gf.' class='latex' />  For this to make any sense, it has to identify any two objects related by such a pair.  So it&#8217;s summing over all the endomorphisms of these equivalence classes.</p>
<p>To get the trace of the hom functor, use <img src='http://s0.wp.com/latex.php?latex=S+%3D+%5Cmbox%7Bhom%7D&amp;bg=fff&amp;fg=222&amp;s=0' alt='S = &#92;mbox{hom}' title='S = &#92;mbox{hom}' class='latex' /> in the analysis above and replace the lollipop with a real arrow.  If that category is just a group, this is the set of conjugacy classes.  If that category is a preorder, then we&#8217;re computing the set of isomorphism classes.</p>
<p>The coend is also used when &#8220;multiplying matrices&#8221;.  Let <img src='http://s0.wp.com/latex.php?latex=S%28c%27%2C+c%29+%3D+T%28b%2C+c%29+%5Ctimes+U%28c%27%2C+d%29.&amp;bg=fff&amp;fg=222&amp;s=0' alt='S(c&#039;, c) = T(b, c) &#92;times U(c&#039;, d).' title='S(c&#039;, c) = T(b, c) &#92;times U(c&#039;, d).' class='latex' />  Then the top set consists of triples <img src='http://s0.wp.com/latex.php?latex=%28f%3A+c%5Cto+c%27%2C%5Cquad+g%3Ab+%5Cmultimap+c%2C%5Cquad+h%3Ac%27+%5Cmultimap+d%29%2C&amp;bg=fff&amp;fg=222&amp;s=0' alt='(f: c&#92;to c&#039;,&#92;quad g:b &#92;multimap c,&#92;quad h:c&#039; &#92;multimap d),' title='(f: c&#92;to c&#039;,&#92;quad g:b &#92;multimap c,&#92;quad h:c&#039; &#92;multimap d),' class='latex' /> the bottom set of pairs <img src='http://s0.wp.com/latex.php?latex=%28g%3Ab+%5Cmultimap+c%2C+%5Cquad+h%3Ac+%5Cmultimap+d%29%2C&amp;bg=fff&amp;fg=222&amp;s=0' alt='(g:b &#92;multimap c, &#92;quad h:c &#92;multimap d),' title='(g:b &#92;multimap c, &#92;quad h:c &#92;multimap d),' class='latex' /> and the coend is the bottom set modulo</p>
<p align="center"><img src='http://s0.wp.com/latex.php?latex=%28%5Cdisplaystyle+b+%5Cstackrel%7Bg%7D%7B%5Cmultimap%7D+c+%5Cstackrel%7Bc%7D%7B%5Cto%7D+c%2C+%5Cquad+c+%5Cstackrel%7Bf%7D%7B%5Cto%7D+c%27+%5Cstackrel%7Bh%7D%7B%5Cmultimap%7D+d%29+%5Cquad+%5Csim+%5Cquad++%28%5Cdisplaystyle+b+%5Cstackrel%7Bg%7D%7B%5Cmultimap%7D+c+%5Cstackrel%7Bf%7D%7B%5Cto%7D+c%27%2C+%5Cquad+c%27+%5Cstackrel%7Bc%27%7D%7B%5Cto%7D+c%27+%5Cstackrel%7Bh%7D%7B%5Cmultimap%7D+d%29&amp;bg=fff&amp;fg=222&amp;s=0' alt='(&#92;displaystyle b &#92;stackrel{g}{&#92;multimap} c &#92;stackrel{c}{&#92;to} c, &#92;quad c &#92;stackrel{f}{&#92;to} c&#039; &#92;stackrel{h}{&#92;multimap} d) &#92;quad &#92;sim &#92;quad  (&#92;displaystyle b &#92;stackrel{g}{&#92;multimap} c &#92;stackrel{f}{&#92;to} c&#039;, &#92;quad c&#039; &#92;stackrel{c&#039;}{&#92;to} c&#039; &#92;stackrel{h}{&#92;multimap} d)' title='(&#92;displaystyle b &#92;stackrel{g}{&#92;multimap} c &#92;stackrel{c}{&#92;to} c, &#92;quad c &#92;stackrel{f}{&#92;to} c&#039; &#92;stackrel{h}{&#92;multimap} d) &#92;quad &#92;sim &#92;quad  (&#92;displaystyle b &#92;stackrel{g}{&#92;multimap} c &#92;stackrel{f}{&#92;to} c&#039;, &#92;quad c&#039; &#92;stackrel{c&#039;}{&#92;to} c&#039; &#92;stackrel{h}{&#92;multimap} d)' class='latex' /></p>
<p>That is, it doesn&#8217;t matter if you think of <img src='http://s0.wp.com/latex.php?latex=f&amp;bg=fff&amp;fg=222&amp;s=0' alt='f' title='f' class='latex' /> as connected to <img src='http://s0.wp.com/latex.php?latex=g&amp;bg=fff&amp;fg=222&amp;s=0' alt='g' title='g' class='latex' /> or to <img src='http://s0.wp.com/latex.php?latex=h&amp;bg=fff&amp;fg=222&amp;s=0' alt='h' title='h' class='latex' />; the connection is associative, so you can go all the way from <img src='http://s0.wp.com/latex.php?latex=b&amp;bg=fff&amp;fg=222&amp;s=0' alt='b' title='b' class='latex' /> to <img src='http://s0.wp.com/latex.php?latex=d.&amp;bg=fff&amp;fg=222&amp;s=0' alt='d.' title='d.' class='latex' /></p>
<p>Notice here how a morphism can turn &#8220;inside out&#8221;: when <img src='http://s0.wp.com/latex.php?latex=f&amp;bg=fff&amp;fg=222&amp;s=0' alt='f' title='f' class='latex' /> and the identities surround a morphism in <img src='http://s0.wp.com/latex.php?latex=S&amp;bg=fff&amp;fg=222&amp;s=0' alt='S' title='S' class='latex' />, it&#8217;s the same as being surrounded <i>by</i> morphisms in <img src='http://s0.wp.com/latex.php?latex=T&amp;bg=fff&amp;fg=222&amp;s=0' alt='T' title='T' class='latex' /> and <img src='http://s0.wp.com/latex.php?latex=U&amp;bg=fff&amp;fg=222&amp;s=0' alt='U' title='U' class='latex' />; this is the difference between a trace, where we&#8217;re repeating indices on the same matrix, and matrix multiplication, where we&#8217;re repeating the column of the first matrix in the row of the second matrix.</p>
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